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Assembly Name: uagpf v2.0

Name: Ribosomal protein S15

Term: IPR000589  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene6060 uagpf v2.0 751
AutoFact: S15/NS1, RNA-binding protein [Arabidopsis thaliana] gb|AAF82151.1|AC034256_15 Contains similarity to an unknown protein T21F11.5 gi|6730725 from Arabidopsis thaliana BAC T21F11 gb|AC018849 and contains a Ribosomal Protein S15 PF|00312 domain gb|AAK32782.1 0.0
FL-Next: tr=Structural constituent of ribosome, putative; Ricinus communis (Castor bean). 0.0
Blast2go: s15 rna-binding protein 0.0
C-terminus
uagpf_v2_unigene6387 uagpf v2.0 1193
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ribosomal protein s15 family protein 3.47947e-20
N-terminus
uagpf_v2_unigene12594 uagpf v2.0 571
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SSI9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gdsl esterase lipase 0.0
N-terminus
uagpf_v2_unigene17275 uagpf v2.0 882
AutoFact: 40S ribosomal protein S13-1 n=22 Tax=core eudicotyledons RepID=RS131_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s13 0.0
Complete
uagpf_v2_unigene20450 uagpf v2.0 1396
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Complete
uagpf_v2_unigene28790 uagpf v2.0 501
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
FL-Next: tr=Gypsy/Ty-3 retroelement polyprotein; 69905-74404; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: retrotransposon protein 0.0
Internal
uagpf_v2_unigene29440 uagpf v2.0 238
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SSI9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gdsl esterase lipase 0.0
Putative C-terminus
uagpf_v2_unigene34737 uagpf v2.0 393
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 3.01564e-32
Complete
uagpf_v2_unigene34875 uagpf v2.0 268
AutoFact: Pol protein (Fragment) n=2 Tax=Picea abies RepID=Q9M6P0_PICAB 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pol protein 8.61406e-21
Internal
uagpf_v2_unigene37217 uagpf v2.0 402
AutoFact: S15/NS1, RNA-binding protein [Arabidopsis thaliana] gb|AAF82151.1|AC034256_15 Contains similarity to an unknown protein T21F11.5 gi|6730725 from Arabidopsis thaliana BAC T21F11 gb|AC018849 and contains a Ribosomal Protein S15 PF|00312 domain gb|AAK32782.1 0.0
FL-Next: tr=Structural constituent of ribosome, putative; Ricinus communis (Castor bean). 0.0
Blast2go: s15 rna-binding protein 0.0
C-terminus
uagpf_v2_unigene39926 uagpf v2.0 435
AutoFact: putative RNA helicase [Oryza sativa Japonica Group] dbj|BAD35820.1| putative RNA helicase [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: deah-box nuclear pre-mrna splicing factor 0.0
Putative C-terminus
uagpf_v2_unigene41777 uagpf v2.0 412
AutoFact: putative RNA helicase [Oryza sativa Japonica Group] dbj|BAD35820.1| putative RNA helicase [Oryza sativa Japonica Group] 0.0
Blast2go: deah-box nuclear pre-mrna splicing factor 0.0
unknown
uagpf_v2_unigene46981 uagpf v2.0 218
AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Pinus brutia RepID=Q9M6N4_9CONI 2.0e-30
FL-Next: tr=RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: pol protein integrase region 2.85279e-40
Internal
uagpf_v2_unigene53784 uagpf v2.0 436
AutoFact: 40S ribosomal protein S13-1 [Arabidopsis thaliana] sp|P59223.1|RS131_ARATH RecName: Full=40S ribosomal protein S13-1 gb|AAK55717.1|AF380636_1 AT3g60770/T4C21_180 [Arabidopsis thaliana] gb|AAL06976.1| AT3g60770/T4C21_180 [Arabidopsis thaliana] gb|AAL91269. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene55017 uagpf v2.0 203
AutoFact: Unassigned protein
Blast2go: disease resistance protein 7.31522e-29
unknown
uagpf_v2_unigene55790 uagpf v2.0 427
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00850; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: retrotransposon unclassified 0.0
Putative Complete
uagpf_v2_unigene56006 uagpf v2.0 416
AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 1.0e-34
FL-Next: tr=Gypsy/Ty-3 retroelement polyprotein; 69905-74404; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pol protein integrase region 1.04593e-34
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain