Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Zinc finger, Dof-type

Term: IPR003851  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene6854 uagpf v2.0 566
AutoFact: Dof transcription factor n=1 Tax=Pinus pinaster RepID=B0BCH1_PINPS 0.0
Blast2go: dof zinc finger 0.0
unknown
uagpf_v2_unigene9117 uagpf v2.0 656
AutoFact: Dof domain zinc finger DNA-binding protein n=1 Tax=Picea abies RepID=Q14DX9_PICAB 0.0
Blast2go: dof zinc finger 0.0
unknown
uagpf_v2_unigene10107 uagpf v2.0 628
AutoFact: Dof domain zinc finger DNA-binding protein n=1 Tax=Picea abies RepID=Q14DX9_PICAB 1.0e-17
Blast2go: cycling dof factor-like 1 7.57139e-19
unknown
uagpf_v2_unigene11239 uagpf v2.0 597
AutoFact: Zn finger protein [Nicotiana tabacum] 2.0e-33
Blast2go: f-box family protein 3.1703e-41
unknown
uagpf_v2_unigene15365 uagpf v2.0 509
AutoFact: Zn finger protein [Nicotiana tabacum] 2.0e-33
Blast2go: f-box family protein 3.1703e-41
unknown
uagpf_v2_unigene16396 uagpf v2.0 1140
AutoFact: F-box family protein n=2 Tax=Populus trichocarpa RepID=B9IES2_POPTR 8.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 1.05887e-38
N-terminus
uagpf_v2_unigene17694 uagpf v2.0 1788
AutoFact: Dof transcription factor n=1 Tax=Pinus pinaster RepID=B0BCH1_PINPS 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
Complete
uagpf_v2_unigene29349 uagpf v2.0 360
AutoFact: Dof zinc finger protein 12 n=1 Tax=Hordeum vulgare subsp. vulgare RepID=A5HWG1_HORVD 9.0e-28
Blast2go: dof-like protein 34 0.0
unknown
uagpf_v2_unigene29519 uagpf v2.0 513
AutoFact: Dof transcription factor n=1 Tax=Pinus pinaster RepID=B0BCH1_PINPS 0.0
FL-Next: tr=Dof transcription factor; Pinus pinaster (Maritime pine). 0.0
Blast2go: dof zinc finger 0.0
Internal
uagpf_v2_unigene29829 uagpf v2.0 478
AutoFact: SWI/SNF complex subunit SWI3B [Arabidopsis thaliana] sp|Q84JG2.1|SWI3B_ARATH RecName: Full=SWI/SNF complex subunit SWI3B; Short=AtSWI3B; AltName: Full=Transcription regulatory protein SWI3B gb|AAO42112.1| putative SWI/SNF complex subunit SW13 [Arabidopsis 1.0e-39
FL-Next: sp=SWI/SNF complex subunit SWI3B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf complex subunit swi3b 0.0
C-terminus
uagpf_v2_unigene30060 uagpf v2.0 508
AutoFact: Dof domain zinc finger DNA-binding protein n=1 Tax=Picea abies RepID=Q14DX9_PICAB 5.0e-31
Blast2go: f-box family protein 6.92407e-34
Coding
uagpf_v2_unigene30505 uagpf v2.0 569
AutoFact: Zn finger protein [Nicotiana tabacum] 2.0e-33
Blast2go: f-box family protein 3.1703e-41
Putative coding
uagpf_v2_unigene30705 uagpf v2.0 360
AutoFact: SWI/SNF complex subunit SWI3B [Arabidopsis thaliana] sp|Q84JG2.1|SWI3B_ARATH RecName: Full=SWI/SNF complex subunit SWI3B; Short=AtSWI3B; AltName: Full=Transcription regulatory protein SWI3B gb|AAO42112.1| putative SWI/SNF complex subunit SW13 [Arabidopsis 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf complex subunit swi3b 0.0
Internal
uagpf_v2_unigene31119 uagpf v2.0 289
AutoFact: Dof transcription factor n=1 Tax=Pinus pinaster RepID=B0BCH1_PINPS 0.0
FL-Next: tr=Dof transcription factor; Pinus pinaster (Maritime pine). 0.0
Blast2go: dof zinc finger 0.0
N-terminus
uagpf_v2_unigene35291 uagpf v2.0 297
AutoFact: DOF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIX8_MALDO 9.99995e-41
Blast2go: f-box family protein 2.8026e-45
unknown
uagpf_v2_unigene41324 uagpf v2.0 378
AutoFact: Zn finger protein [Nicotiana tabacum] 2.0e-33
Blast2go: f-box family protein 3.1703e-41
unknown
uagpf_v2_unigene45588 uagpf v2.0 396
AutoFact: SWI/SNF complex subunit SWI3B [Arabidopsis thaliana] sp|Q84JG2.1|SWI3B_ARATH RecName: Full=SWI/SNF complex subunit SWI3B; Short=AtSWI3B; AltName: Full=Transcription regulatory protein SWI3B gb|AAO42112.1| putative SWI/SNF complex subunit SW13 [Arabidopsis 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf complex subunit swi3b 0.0
Internal
uagpf_v2_unigene48774 uagpf v2.0 329
AutoFact: DOF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIX8_MALDO 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 2.8026e-45
N-terminus
uagpf_v2_unigene49495 uagpf v2.0 426
AutoFact: Dof domain zinc finger DNA-binding protein n=1 Tax=Picea abies RepID=Q14DX9_PICAB 3.0e-34
FL-Next: tr=Dof domain zinc finger DNA-binding protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: dof domain zinc finger dna-binding protein 6.58499e-34
N-terminus
uagpf_v2_unigene53849 uagpf v2.0 422
AutoFact: F-box family protein n=1 Tax=Populus trichocarpa RepID=B9GK99_POPTR 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 3.87912e-29
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain