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Assembly Name: uagpf v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene9204 uagpf v2.0 1104
AutoFact: copine-like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rglg2 0.0
N-terminus
uagpf_v2_unigene9298 uagpf v2.0 368
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 0.0
Complete
uagpf_v2_unigene9374 uagpf v2.0 1132
AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 2 [Arabidopsis thaliana] sp|Q8VZJ9.1|Y4330_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At4g00330 gb|AAL36420.1| unknown protein [Arabidopsis thaliana] gb|AAM91688.1| unk 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable leucine-rich repeat receptor-like protein kinase at4g00330-like 0.0
C-terminus
uagpf_v2_unigene9415 uagpf v2.0 844
AutoFact: Transmembrane Fragile-X-F-associated protein [Arabidopsis thaliana] gb|AEE35529.1| Transmembrane Fragile-X-F-associated protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane fragile-x-f-associated protein 0.0
Internal
uagpf_v2_unigene9504 uagpf v2.0 501
AutoFact: C3HC4-type RING zinc finger protein-like [Oryza sativa Japonica Group] dbj|BAD31446.1| C3HC4-type RING zinc finger protein-like [Oryza sativa Japonica Group] 9.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.7995e-24
Internal
uagpf_v2_unigene9618 uagpf v2.0 747
AutoFact: E3 ubiquitin-protein ligase XBAT33 [Arabidopsis thaliana] sp|Q4FE45.1|XB33_ARATH RecName: Full=E3 ubiquitin-protein ligase XBAT33; AltName: Full=Ankyrin repeat domain and RING finger-containing protein XBAT33; AltName: Full=Protein XB3 homolog 3 gb|AAZ140 0.0
FL-Next: sp=E3 ubiquitin-protein ligase XBAT33; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase xbat33-like 0.0
Internal
uagpf_v2_unigene9639 uagpf v2.0 556
AutoFact: putative tyrosine-protein phosphatase [Arabidopsis thaliana] sp|Q9ZVN4.1|Y1500_ARATH RecName: Full=Probable tyrosine-protein phosphatase At1g05000 gb|AAC97999.1| ESTs gb|H36249, gb|AA59732 and gb|AA651219 come from this gene [Arabidopsis thaliana] gb|AAO6 0.0
Blast2go: tyrosine specific protein phosphatase family protein 0.0
unknown
uagpf_v2_unigene9845 uagpf v2.0 650
AutoFact: FANCL_C multi-domain protein 1.0e-06
FL-Next: sp=E3 ubiquitin-protein ligase listerin; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase listerin-like 0.0
C-terminus
uagpf_v2_unigene9966 uagpf v2.0 790
AutoFact: Zinc finger family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7LM92_ARALL 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring u-box domain-containing protein 7.8582e-19
C-terminus
uagpf_v2_unigene10092 uagpf v2.0 679
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene10155 uagpf v2.0 363
AutoFact: shaggy-like kinase alpha [Arabidopsis thaliana] 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycogen synthase kinase-3 2.74593e-34
Internal
uagpf_v2_unigene10257 uagpf v2.0 361
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001078119.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF20226.1|AC012395_13 putative RING zinc finger protein [Arabidopsis thaliana] gb|AEE74513.1| RING/U-box domain 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein ligase zinc ion binding protein 0.0
N-terminus
uagpf_v2_unigene10388 uagpf v2.0 553
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-finger domain-containing protein 0.0
C-terminus
uagpf_v2_unigene10403 uagpf v2.0 810
AutoFact: putative E3 ubiquitin-protein ligase BAH1-like protein [Arabidopsis thaliana] sp|Q8GW10.1|BAH1L_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase BAH1-like; AltName: Full=RING finger protein 178 dbj|BAC43727.1| unknown protein [Arabidopsis thaliana 0.0
Blast2go: e3 ubiquitin-protein ligase bah1-like protein 0.0
Putative coding
uagpf_v2_unigene10413 uagpf v2.0 469
AutoFact: Endonuclease/exonuclease/phosphatase family protein-like n=2 Tax=Oryza sativa RepID=Q5ZE24_ORYSJ 4.00001e-40
FL-Next: sp=Carbon catabolite repressor protein 4 homolog 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 6.5861e-44
C-terminus
uagpf_v2_unigene10421 uagpf v2.0 1365
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R796_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
C-terminus
uagpf_v2_unigene10512 uagpf v2.0 473
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-16
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: helicase and zinc finger domain-containing protein 0.0
Internal
uagpf_v2_unigene10662 uagpf v2.0 532
AutoFact: Unassigned protein
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene10704 uagpf v2.0 437
AutoFact: Ankyrin-repeat containing protein, putative n=1 Tax=Ricinus communis RepID=B9RG78_RICCO 0.0
FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: at5g13530-like protein 0.0
Internal
uagpf_v2_unigene10722 uagpf v2.0 1481
AutoFact: RecName: Full=Vacuolar protein sorting-associated protein 41 homolog gb|AAB60857.1| VPS41 [Solanum lycopersicum] 0.0
Blast2go: vacuolar protein sorting-associated protein 41 homolog 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain