Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene7760 uagpf v2.0 655
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0P5_RICCO 1.4013e-45
• Blast2go: zinc finger 0.0
Putative coding
uagpf_v2_unigene7774 uagpf v2.0 412
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SVA9_RICCO 0.0
• Blast2go: protein binding 0.0
unknown
uagpf_v2_unigene7802 uagpf v2.0 688
• AutoFact: phytochrome and flowering time regulatory protein 1 [Arabidopsis thaliana] gb|AEE30640.1| phytochrome and flowering time regulatory protein 1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phytochrome and flowering time regulatory protein 1 0.0
Internal
uagpf_v2_unigene7854 uagpf v2.0 673
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RUA7_RICCO 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger 1 3.99746e-35
C-terminus
uagpf_v2_unigene7937 uagpf v2.0 435
• AutoFact: RING-H2 finger protein ATL73 [Arabidopsis thaliana] sp|Q9FLC6.1|ATL73_ARATH RecName: Full=RING-H2 finger protein ATL73; Flags: Precursor dbj|BAB09971.1| RING zinc finger protein-like [Arabidopsis thaliana] gb|AED90850.1| RING-H2 finger protein ATL73 [Arab 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 finger protein atl72-like 0.0
C-terminus
uagpf_v2_unigene7988 uagpf v2.0 407
• AutoFact: Makorin-1, putative n=1 Tax=Ricinus communis RepID=B9SL96_RICCO 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase makorin; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: ccch-type zinc finger protein c3h69 0.0
N-terminus
uagpf_v2_unigene8042 uagpf v2.0 436
• AutoFact: E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis thaliana] sp|Q8LPN7.1|RNG1L_ARATH RecName: Full=E3 ubiquitin-protein ligase RING1-like; AltName: Full=RING finger protein 1 gb|AAM19951.1| AT3g19950/MPN9_19 [Arabidopsis thaliana] gb|AAN18152.1| 1.0e-33
• Blast2go: ring finger protein 0.0
unknown
uagpf_v2_unigene8131 uagpf v2.0 656
• AutoFact: Unassigned protein
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene8305 uagpf v2.0 411
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001078409.1| RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAA19684.1| putative protein [Arabidopsis thaliana] emb|CAB78969.1| putative protein [Arabidopsis thaliana] gb| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene8315 uagpf v2.0 329
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0P5_RICCO 3.00018e-42
• Blast2go: zinc finger 0.0
Coding
uagpf_v2_unigene8406 uagpf v2.0 644
• AutoFact: TED3; TED3 (REVERSAL OF THE DET PHENOTYPE 3); protein binding / zinc ion binding; K06664 peroxin-2 0.0
• FL-Next: sp=Peroxisome biogenesis protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene8430 uagpf v2.0 608
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SPH2_RICCO 0.0
• Blast2go: protein binding 0.0
unknown
uagpf_v2_unigene8443 uagpf v2.0 664
• AutoFact: DUF616 domain containing protein 0.0
• FL-Next: tr=AT5g42660/MJB21_3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: uncharacterized protein 0.0
C-terminus
uagpf_v2_unigene8549 uagpf v2.0 319
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R796_RICCO 9.80909e-45
• Blast2go: protein binding 0.0
unknown
uagpf_v2_unigene8600 uagpf v2.0 771
• AutoFact: Probable protein phosphatase 2C 68 n=3 Tax=Brassicaceae RepID=P2C68_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein phosphatase 2c 68 0.0
Putative Complete
uagpf_v2_unigene8612 uagpf v2.0 851
• AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_974396.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] emb|CAB61981.1| putative protein [Arabidopsis thaliana] dbj|BAE98651.1| hypothetical protein [Arabidop 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring fyve phd zinc finger-containing protein 0.0
C-terminus
uagpf_v2_unigene8791 uagpf v2.0 1247
• AutoFact: putative methyltransferase PMT21 [Arabidopsis thaliana] ref|NP_849408.1| putative methyltransferase PMT21 [Arabidopsis thaliana] sp|Q94II3.1|PMTL_ARATH RecName: Full=Probable methyltransferase PMT21; AltName: Full=Protein EARLY-RESPONSIVE TO DEHYDRATION 3 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: methyltransferase pmt20 0.0
C-terminus
uagpf_v2_unigene8841 uagpf v2.0 395
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_851231.1| RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAB08241.1| unnamed protein product [Arabidopsis thaliana] gb|AED97347.1| RING/U-box domain-containing protein [Ar 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
Internal
uagpf_v2_unigene9136 uagpf v2.0 388
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAW80858.1| At5g45290 [Arabidopsis thaliana] gb|AAW80870.1| At5g45290 [Arabidopsis thaliana] gb|AED95227.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger protein 0.0
Internal
uagpf_v2_unigene9145 uagpf v2.0 677
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RCF4_RICCO 4.0e-25
• FL-Next: tr=Zinc finger protein, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: e3 ubiquitin-protein ligase rha1b-like 1.75794e-33
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain