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Assembly Name: uagpf v2.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene6893 uagpf v2.0 818
• AutoFact: RING finger-like protein [Oryza sativa Japonica Group] dbj|BAB90773.1| RING finger-like protein [Oryza sativa Japonica Group] dbj|BAG89633.1| unnamed protein product [Oryza sativa Japonica Group] 6.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family protein 0.0
N-terminus
uagpf_v2_unigene6909 uagpf v2.0 882
• AutoFact: E3 ubiquitin ligase BIG BROTHER [Arabidopsis thaliana] ref|NP_001030922.1| E3 ubiquitin ligase BIG BROTHER [Arabidopsis thaliana] sp|Q8L649.1|BB_ARATH RecName: Full=E3 ubiquitin ligase BIG BROTHER; AltName: Full=Protein ENHANCER OF DA1-1 emb|CAD32249.1| p 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase 0.0
N-terminus
uagpf_v2_unigene6975 uagpf v2.0 449
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAR92268.1| At1g47570 [Arabidopsis thaliana] gb|AAS99681.1| At1g47570 [Arabidopsis thaliana] gb|AEE32187.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
Internal
uagpf_v2_unigene7023 uagpf v2.0 509
• AutoFact: putative methyltransferase PMT3 [Arabidopsis thaliana] ref|NP_001031639.1| putative methyltransferase PMT3 [Arabidopsis thaliana] sp|Q93YV7.1|PMT3_ARATH RecName: Full=Probable methyltransferase PMT3 gb|AAL24095.1| putative ankyrin protein [Arabidopsis tha 0.0
• Blast2go: methyltransferase pmt3 0.0
Coding
uagpf_v2_unigene7042 uagpf v2.0 540
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0P5_RICCO 3.00018e-42
• Blast2go: zinc finger 0.0
Putative coding
uagpf_v2_unigene7055 uagpf v2.0 604
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T0P2_RICCO 0.0
• Blast2go: ring finger and transmembrane domain-containing protein 2-like 0.0
unknown
uagpf_v2_unigene7056 uagpf v2.0 603
• AutoFact: RING-H2 finger protein ATL47 [Arabidopsis thaliana] sp|Q8GW38.1|ATL47_ARATH RecName: Full=RING-H2 finger protein ATL47 dbj|BAC43674.1| unknown protein [Arabidopsis thaliana] gb|AAQ55274.1| At1g23980 [Arabidopsis thaliana] gb|AEE30463.1| RING-H2 finger pro 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene7076 uagpf v2.0 632
• AutoFact: Transmembrane Fragile-X-F-associated protein [Arabidopsis thaliana] gb|AEE35529.1| Transmembrane Fragile-X-F-associated protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transmembrane fragile-x-f-associated protein 0.0
C-terminus
uagpf_v2_unigene7148 uagpf v2.0 943
• AutoFact: Zinc finger, C3HC4 type family protein n=3 Tax=Andropogoneae RepID=B6SSJ0_MAIZE 1.0e-15
• Blast2go: protein 7.79632e-16
Coding
uagpf_v2_unigene7199 uagpf v2.0 1348
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974453.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974454.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001190122.1| RING/U-box domain-con 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc c3hc4 type family protein 0.0
Putative Complete
uagpf_v2_unigene7202 uagpf v2.0 814
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974832.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAM97093.1| RING finger-like protein [Arabidopsis thaliana] gb|AAT47817.1| At5g24870 [Arabidopsis thaliana] gb|AED9 1.0e-32
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: ring u-box domain-containing protein 1.4013e-45
Complete
uagpf_v2_unigene7320 uagpf v2.0 401
• AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 finger protein 0.0
N-terminus
uagpf_v2_unigene7416 uagpf v2.0 845
• AutoFact: PREDICTED: similar to zinc finger (C3HC4-type RING finger) family protein n=1 Tax=Vitis vinifera RepID=UPI000198426A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
N-terminus
uagpf_v2_unigene7448 uagpf v2.0 609
• AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase BRE1-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
uagpf_v2_unigene7458 uagpf v2.0 564
• AutoFact: pfam07576, BRAP2, BRCA1-associated protein 2 9.0e-28
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: brca1-associated protein 0.0
C-terminus
uagpf_v2_unigene7515 uagpf v2.0 853
• AutoFact: cytokinin trans-hydroxylase [Arabidopsis thaliana] gb|AAD10659.1| putative Cytochrome P450 protein [Arabidopsis thaliana] gb|AAS47628.1| At1g67110 [Arabidopsis thaliana] gb|AAT06445.1| At1g67110 [Arabidopsis thaliana] gb|AEE34597.1| cytokinin trans-hydrox 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cytokinin hydroxylase-like 0.0
N-terminus
uagpf_v2_unigene7568 uagpf v2.0 624
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974785.1| RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAC01778.1| putative protein [Arabidopsis thaliana] gb|AAM98197.1| unknown protein [Arabidopsis thaliana] gb|AAP13 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase at3g02290-like 0.0
C-terminus
uagpf_v2_unigene7571 uagpf v2.0 644
• AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene7585 uagpf v2.0 1620
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001078409.1| RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAA19684.1| putative protein [Arabidopsis thaliana] emb|CAB78969.1| putative protein [Arabidopsis thaliana] gb| 7.00649e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
uagpf_v2_unigene7652 uagpf v2.0 1075
• AutoFact: zinc finger CCCH domain-containing protein 51 [Arabidopsis thaliana] ref|NP_850780.1| zinc finger CCCH domain-containing protein 51 [Arabidopsis thaliana] sp|Q9FNG6.1|C3H51_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 51; Short=AtC3H51 d 0.0
• FL-Next: sp=Zinc finger CCCH domain-containing protein 15; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: zinc finger ccch domain-containing protein 51 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain