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Assembly Name: uagpf v2.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene37 uagpf v2.0 456
AutoFact: DME; DME (DEMETER); DNA N-glycosylase/ DNA-(apurinic or apyrimidinic site) lyase 8.00141e-43
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: transcriptional activator demeter-like 0.0
Internal
uagpf_v2_unigene67 uagpf v2.0 376
AutoFact: Predicted protein n=11 Tax=Physcomitrella patens RepID=A9S6L2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene97 uagpf v2.0 403
AutoFact: protein UV-B resistance 8 [Arabidopsis thaliana] dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana] gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana] gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana] gb|AED97805.1| protein UV-B 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rcc1 and btb domain-containing protein 2.28095e-25
Internal
uagpf_v2_unigene234 uagpf v2.0 1290
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: regulator of chromosome expressed 0.0
Putative C-terminus
uagpf_v2_unigene609 uagpf v2.0 1674
AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 3 [Arabidopsis thaliana] gb|AAK32926.1|AF367339_1 At2g11520/F14P14.15 [Arabidopsis thaliana] gb|AAD28055.2| putative protein kinase [Arabidopsis thaliana] gb|AAM16251.1| At2g11520/F14P14.15 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
uagpf_v2_unigene632 uagpf v2.0 436
AutoFact: FOG: RCC1 domain (ISS) [Ostreococcus tauri] emb|CAL51564.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: regulator of chromosome condensation repeat-containing protein 0.0
Internal
uagpf_v2_unigene687 uagpf v2.0 497
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
Internal
uagpf_v2_unigene700 uagpf v2.0 334
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene777 uagpf v2.0 713
AutoFact: Os10g0400900 protein (Fragment) n=3 Tax=Oryza sativa Japonica Group RepID=Q0IXT3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: colon cancer-associated protein mic1-like containing expressed 0.0
C-terminus
uagpf_v2_unigene911 uagpf v2.0 402
AutoFact: DEAD box protein P68 [Pisum sativum] 0.0
Blast2go: protein 0.0
Coding
uagpf_v2_unigene990 uagpf v2.0 479
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: laccase 0.0
C-terminus
uagpf_v2_unigene1254 uagpf v2.0 664
AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
FL-Next: sp=DNA damage-binding protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: dna damage-binding protein 1a 0.0
C-terminus
uagpf_v2_unigene1273 uagpf v2.0 709
AutoFact: ARO1-like protein (Fragment) n=1 Tax=Pinus taeda RepID=B7FF15_PINTA 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: armadillo repeat containing protein 0.0
C-terminus
uagpf_v2_unigene1686 uagpf v2.0 829
AutoFact: methyltransferase-like protein 1 [Arabidopsis thaliana] emb|CAB39622.1| putative protein [Arabidopsis thaliana] emb|CAB78121.1| putative protein [Arabidopsis thaliana] gb|AEE82823.1| methyltransferase-like protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: methyltransferase-like protein 1-like 0.0
C-terminus
uagpf_v2_unigene1841 uagpf v2.0 564
AutoFact: RCC1 domain containing protein 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: regulator of chromosome condensation repeat-containing protein 2.82753e-25
C-terminus
uagpf_v2_unigene1845 uagpf v2.0 585
AutoFact: receptor protein kinase, putative [Arabidopsis thaliana] 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at1g56130-like 4.2838e-36
C-terminus
uagpf_v2_unigene1867 uagpf v2.0 1757
AutoFact: putative protein phosphatase 2C 63 [Arabidopsis thaliana] sp|O81760.1|P2C63_ARATH RecName: Full=Probable protein phosphatase 2C 63; Short=AtPP2C63 gb|AAK50092.1|AF372953_1 AT4g33920/F17I5_110 [Arabidopsis thaliana] emb|CAA19874.1| putative protein [Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable protein phosphatase 2c 63-like 0.0
Complete
uagpf_v2_unigene1897 uagpf v2.0 771
AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 0.0
N-terminus
uagpf_v2_unigene2026 uagpf v2.0 590
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclease harbi1-like 0.0
C-terminus
uagpf_v2_unigene2298 uagpf v2.0 431
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9R8J7_RICCO 0.0
Blast2go: amp dependent 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain