Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene5325 uagpf v2.0 613
AutoFact: Ankyrin-repeat containing protein, putative n=1 Tax=Ricinus communis RepID=B9RG78_RICCO 0.0
FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: at5g13530-like protein 0.0
C-terminus
uagpf_v2_unigene5332 uagpf v2.0 371
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
Blast2go: dna helicase ino80-like 0.0
unknown
uagpf_v2_unigene5365 uagpf v2.0 769
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AEE31132.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring fyve phd zinc finger-containing protein 0.0
C-terminus
uagpf_v2_unigene5437 uagpf v2.0 596
AutoFact: Unassigned protein
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene5616 uagpf v2.0 695
AutoFact: Zinc finger, RING-type [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rhf2a 0.0
N-terminus
uagpf_v2_unigene5633 uagpf v2.0 750
AutoFact: DUF221 domain containing protein 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene5758 uagpf v2.0 1174
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAB10860.1| unnamed protein product [Arabidopsis thaliana] gb|ABD59056.1| At5g62910 [Arabidopsis thaliana] gb|ABG89113.1| ubiquitin-interacting factor 2b [synthetic construct] gb|AED97673.1| 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: anti-virus transcriptional factor 2.84464e-43
C-terminus
uagpf_v2_unigene5820 uagpf v2.0 1109
AutoFact: putative methyltransferase domain-containing protein [Arabidopsis thaliana] emb|CAB80933.1| hypothetical protein [Arabidopsis thaliana] gb|AEE81998.1| putative methyltransferase domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene5861 uagpf v2.0 1005
AutoFact: putative methyltransferase PMT11 [Arabidopsis thaliana] sp|O22285.1|PMTB_ARATH RecName: Full=Probable methyltransferase PMT11 gb|AAB87124.1| expressed protein [Arabidopsis thaliana] gb|AAK96646.1| At2g39750/T5I7.5 [Arabidopsis thaliana] gb|AAM70566.1| At2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable methyltransferase pmt11-like 0.0
Internal
uagpf_v2_unigene5883 uagpf v2.0 705
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF20234.1|AC012395_21 putative RING zinc finger protein [Arabidopsis thaliana] gb|AAV85664.1| At3g07120 [Arabidopsis thaliana] gb|AAW78594.1| At3g07120 [Arabidopsis thaliana] gb|AEE74501.1| R 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ring u-box domain-containing protein 2.8495e-36
C-terminus
uagpf_v2_unigene5885 uagpf v2.0 1137
AutoFact: Putative zinc transporter n=1 Tax=Solanum lycopersicum RepID=A1YIQ6_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zip transporter 0.0
C-terminus
uagpf_v2_unigene5953 uagpf v2.0 502
AutoFact: DUF1644 domain containing protein 6.0e-39
Blast2go: uncharacterized protein 0.0
Coding
uagpf_v2_unigene5975 uagpf v2.0 740
AutoFact: Copine I-like protein n=4 Tax=Oryza RepID=Q6YYC5_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rglg2-like 0.0
N-terminus
uagpf_v2_unigene6051 uagpf v2.0 746
AutoFact: DUF716 domain containing protein 0.0
Blast2go: protein 0.0
Coding
uagpf_v2_unigene6079 uagpf v2.0 518
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H8S6_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: helicase-like transcription factor 0.0
Internal
uagpf_v2_unigene6098 uagpf v2.0 1111
AutoFact: putative E3 ubiquitin-protein ligase BAH1-like protein [Arabidopsis thaliana] sp|Q8GW10.1|BAH1L_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase BAH1-like; AltName: Full=RING finger protein 178 dbj|BAC43727.1| unknown protein [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase bah1-like protein 0.0
N-terminus
uagpf_v2_unigene6239 uagpf v2.0 951
AutoFact: CHY and CTCHY and RING-type zinc finger protein [Arabidopsis thaliana] gb|AED93462.1| CHY and CTCHY and RING-type zinc finger protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger and chy zinc finger domain-containing protein 1-like 0.0
C-terminus
uagpf_v2_unigene6244 uagpf v2.0 2019
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SZY8_RICCO 0.0
FL-Next: sp=E3 ubiquitin-protein ligase RING1; Gossypium hirsutum (Upland cotton) (Gossypium mexicanum). 0.0
Blast2go: e3 ubiquitin-protein ligase ring1-like 0.0
Complete
uagpf_v2_unigene6312 uagpf v2.0 728
AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
Blast2go: cellulose synthase 0.0
unknown
uagpf_v2_unigene6341 uagpf v2.0 696
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RCF4_RICCO 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein rha1b 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain