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Assembly Name: uagpf v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene54056 uagpf v2.0 614
AutoFact: HnRNP n=1 Tax=Hypericum perforatum RepID=D9ZHD1_HYPPE 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.57885e-32
N-terminus
uagpf_v2_unigene54080 uagpf v2.0 549
AutoFact: putative RNA-binding protein [Arabidopsis thaliana] 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.61919e-40
N-terminus
uagpf_v2_unigene54100 uagpf v2.0 522
AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 6.0e-26
Blast2go: zinc finger 2.45808e-31
unknown
uagpf_v2_unigene54181 uagpf v2.0 403
AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
uagpf_v2_unigene54206 uagpf v2.0 328
AutoFact: RING-H2 finger protein ATL47 [Arabidopsis thaliana] sp|Q8GW38.1|ATL47_ARATH RecName: Full=RING-H2 finger protein ATL47 dbj|BAC43674.1| unknown protein [Arabidopsis thaliana] gb|AAQ55274.1| At1g23980 [Arabidopsis thaliana] gb|AEE30463.1| RING-H2 finger pro 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene54209 uagpf v2.0 296
AutoFact: Zinc-finger domain of monoamine-oxidase A repressor R1 [Arabidopsis thaliana] dbj|BAF00863.1| hypothetical protein [Arabidopsis thaliana] gb|AEE86755.1| Zinc-finger domain of monoamine-oxidase A repressor R1 [Arabidopsis thaliana] 0.0
Blast2go: ubiquitin-protein ligase zinc ion binding protein 0.0
Putative coding
uagpf_v2_unigene54217 uagpf v2.0 781
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RCF4_RICCO 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 9.6352e-32
Putative Complete
uagpf_v2_unigene54235 uagpf v2.0 327
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RYZ7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene54290 uagpf v2.0 402
AutoFact: Putative RING zinc finger protein n=2 Tax=Arabidopsis RepID=Q9SI09_ARATH 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring u-box domain-containing protein 0.0
Internal
uagpf_v2_unigene54371 uagpf v2.0 362
AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 2.68218e-30
Putative Complete
uagpf_v2_unigene54406 uagpf v2.0 427
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.63787e-24
N-terminus
uagpf_v2_unigene54463 uagpf v2.0 749
AutoFact: ring finger and CHY zinc finger domain-containing protein 1 [Arabidopsis thaliana] dbj|BAB10613.1| PGPD14 protein [Arabidopsis thaliana] gb|AAK96553.1| AT5g22920/MRN17_15 [Arabidopsis thaliana] gb|AAO11551.1| At5g22920/MRN17_15 [Arabidopsis thaliana] gb|A 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 1.51026e-26
Putative Complete
uagpf_v2_unigene54532 uagpf v2.0 405
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_40.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TQ32_VITVI 9.0e-29
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: hydroxyproline-rich glycoprotein family protein 3.22536e-32
Internal
uagpf_v2_unigene54738 uagpf v2.0 309
AutoFact: putative methyltransferase PMT11 [Arabidopsis thaliana] sp|O22285.1|PMTB_ARATH RecName: Full=Probable methyltransferase PMT11 gb|AAB87124.1| expressed protein [Arabidopsis thaliana] gb|AAK96646.1| At2g39750/T5I7.5 [Arabidopsis thaliana] gb|AAM70566.1| At2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable methyltransferase pmt11-like 0.0
Internal
uagpf_v2_unigene55058 uagpf v2.0 506
AutoFact: RING zinc finger protein-like [Oryza sativa Japonica Group] dbj|BAD19854.1| RING zinc finger protein-like [Oryza sativa Japonica Group] dbj|BAG89963.1| unnamed protein product [Oryza sativa Japonica Group] 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 2.6633e-24
Putative C-terminus
uagpf_v2_unigene55086 uagpf v2.0 479
AutoFact: brassinosteroid-responsive RING-H2 [Arabidopsis thaliana] ref|XP_002878382.1| brassinosteroid-responsive ring-H2 [Arabidopsis lyrata subsp. lyrata] gb|AAD27870.1|AF134155_1 BRH1 RING finger protein [Arabidopsis thaliana] emb|CAB71076.1| RING finger protei 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 7.5849e-29
Putative Complete
uagpf_v2_unigene55288 uagpf v2.0 234
AutoFact: Unassigned protein
Blast2go: zinc finger 0.0
unknown
uagpf_v2_unigene55349 uagpf v2.0 474
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Putative C-terminus
uagpf_v2_unigene55361 uagpf v2.0 330
AutoFact: RING finger and CHY zinc finger domain-containing protein 1 n=2 Tax=Zea mays RepID=B6T4N6_MAIZE 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger and chy zinc finger domain-containing protein 1 1.52761e-23
Internal
uagpf_v2_unigene55466 uagpf v2.0 499
AutoFact: Abscisic acid receptor PYR1 n=1 Tax=Fragaria x ananassa RepID=F2YHU9_FRAAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyl2-like 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain