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Assembly Name: uagpf v2.0

Name: Helicase, C-terminal

Term: IPR001650  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene31850 uagpf v2.0 438
• AutoFact: Glutenin_hmw multi-domain protein 4.0e-33
• Blast2go: rdd domain-containing protein 0.0
Coding
uagpf_v2_unigene31892 uagpf v2.0 481
• AutoFact: RNA helicase n=1 Tax=Vigna radiata var. radiata RepID=Q9M6R6_VIGRR 0.0
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 7; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: dead-box atp-dependent rna helicase 7-like 0.0
Internal
uagpf_v2_unigene31959 uagpf v2.0 728
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 13 dbj|BAA95778.1| ATP-dependent RNA helicase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 13 0.0
C-terminus
uagpf_v2_unigene32002 uagpf v2.0 293
• AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
• Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene32020 uagpf v2.0 727
• AutoFact: RNA helicase, ATP-dependent, SK12/DOB1 protein [Arabidopsis thaliana] gb|AAC67203.2| expressed protein [Arabidopsis thaliana] gb|AAO64196.1| putative DEAD/DEAH box RNA helicase (HUA ENHANCER2) [Arabidopsis thaliana] gb|AEC06028.1| RNA helicase, ATP-depend 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hua enhancer 2 0.0
C-terminus
uagpf_v2_unigene32080 uagpf v2.0 309
• AutoFact: RNA helicase n=1 Tax=Vigna radiata var. radiata RepID=Q9M6R6_VIGRR 0.0
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 7; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: dead-box atp-dependent rna helicase 7-like 0.0
Internal
uagpf_v2_unigene32100 uagpf v2.0 300
• AutoFact: ATP-dependent RNA and DNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SEF1_RICCO 0.0
• Blast2go: atp-dependent rna helicase mitochondrial-like 0.0
unknown
uagpf_v2_unigene32136 uagpf v2.0 648
• AutoFact: putative helicase [Arabidopsis thaliana] 0.0
• Blast2go: dna helicase ino80-like 0.0
Putative coding
uagpf_v2_unigene32264 uagpf v2.0 420
• AutoFact: Abscisic acid receptor PYL4 n=2 Tax=Arabidopsis RepID=PYL4_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: abscisic acid receptor pyl4 0.0
C-terminus
uagpf_v2_unigene32455 uagpf v2.0 466
• AutoFact: putative helicase [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dea(d h)-box rna helicase family protein 0.0
Internal
uagpf_v2_unigene32781 uagpf v2.0 205
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 0.0
Internal
uagpf_v2_unigene33122 uagpf v2.0 147
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9T0X5_RICCO 0.0
• FL-Next: sp=Putative DEAD-box ATP-dependent RNA helicase 29; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dead-box atp-dependent rna helicase 29-like 0.0
Internal
uagpf_v2_unigene33249 uagpf v2.0 282
• AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
Putative N-terminus
uagpf_v2_unigene33391 uagpf v2.0 213
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S9D0_RICCO 2.0e-21
• FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: uncharacterized protein chloroplastic-like 1.73946e-25
Internal
uagpf_v2_unigene33475 uagpf v2.0 424
• AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=2 Tax=Physcomitrella patens RepID=A9RV91_PHYPA 0.0
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: endoribonuclease dicer 0.0
Internal
uagpf_v2_unigene33736 uagpf v2.0 246
• AutoFact: Endoribonuclease Dicer homolog 1 n=4 Tax=Poaceae RepID=DCL1_ORYSJ 0.0
• Blast2go: endoribonuclease dicer homolog 1-like 0.0
Coding
uagpf_v2_unigene33776 uagpf v2.0 415
• AutoFact: putative DEAD-box protein abstrakt [Trifolium pratense] 0.0
• Blast2go: dead-box protein abstrakt 0.0
Coding
uagpf_v2_unigene33959 uagpf v2.0 286
• AutoFact: putative DNA repair protein rhp54 [Oryza sativa Japonica Group] 8.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rad54-like protein 0.0
C-terminus
uagpf_v2_unigene33978 uagpf v2.0 422
• AutoFact: putative helicase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead deah box helicase 0.0
Internal
uagpf_v2_unigene34256 uagpf v2.0 156
• AutoFact: DEAD-box ATP-dependent RNA helicase 18 [Arabidopsis thaliana] sp|Q9FLB0.1|RH18_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 18 dbj|BAB09988.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AED90875.1| DEAD-box ATP-dependent 9.0e-27
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dead-box atp-dependent rna helicase 18-like 6.30339e-35
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain