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Assembly Name: uagpf v2.0

Name: Winged helix-turn-helix transcription repressor DNA-binding

Term: IPR011991  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene27060 uagpf v2.0 590
AutoFact: putative transcription initiation factor IIF beta subunit [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription initiation factor iif subunit 0.0
N-terminus
uagpf_v2_unigene27253 uagpf v2.0 297
AutoFact: COP9 signalosome complex subunit 3 [Arabidopsis thaliana] sp|Q8W575.2|CSN3_ARATH RecName: Full=COP9 signalosome complex subunit 3; Short=Signalosome subunit 3; AltName: Full=Protein FUSCA 11 gb|AAL58102.1|AF395059_1 CSN complex subunit 3 [Arabidopsis thal 0.0
FL-Next: sp=COP9 signalosome complex subunit 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cop9 signalosome complex subunit 3 0.0
Internal
uagpf_v2_unigene27282 uagpf v2.0 559
AutoFact: O-methyltransferase n=3 Tax=Pinus RepID=O24287_PINRA 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: caffeic acid 3-o-methyltransferase 5.7108e-40
C-terminus
uagpf_v2_unigene27345 uagpf v2.0 465
AutoFact: Phototropic-responsive NPH3 family protein [Arabidopsis thaliana] sp|Q9LUB9.1|Y5813_ARATH RecName: Full=BTB/POZ domain-containing protein At5g48130 dbj|BAA96993.1| unnamed protein product [Arabidopsis thaliana] gb|AED95622.1| Phototropic-responsive NPH3 f 6.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phototropic-responsive nph3 family protein 3.79752e-43
Internal
uagpf_v2_unigene27807 uagpf v2.0 159
AutoFact: putative transcription initiation factor IIF beta subunit [Oryza sativa Japonica Group] 0.0
Blast2go: transcription initiation factor iif subunit 0.0
unknown
uagpf_v2_unigene27874 uagpf v2.0 439
AutoFact: winged-helix DNA-binding transcription factor family protein [Arabidopsis thaliana] gb|AAM10313.1| AT5g66100/K2A18_18 [Arabidopsis thaliana] gb|AAN31109.1| At5g66100/K2A18_18 [Arabidopsis thaliana] gb|AED98159.1| winged-helix DNA-binding transcription fac 5.0e-19
Blast2go: lupus la 9.83978e-38
Putative coding
uagpf_v2_unigene27916 uagpf v2.0 384
AutoFact: Os01g0570500 protein n=3 Tax=Oryza sativa RepID=Q656Y0_ORYSJ 0.0
Blast2go: protein 0.0
Coding
uagpf_v2_unigene28096 uagpf v2.0 503
AutoFact: O-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9S0A7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: caffeic acid 3-o-methyltransferase 0.0
N-terminus
uagpf_v2_unigene28232 uagpf v2.0 1427
AutoFact: Heat stress transcription factor B-2b n=3 Tax=Oryza sativa RepID=HFB2B_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock factor protein 7 0.0
Putative N-terminus
uagpf_v2_unigene28339 uagpf v2.0 435
AutoFact: pfam00294, PfkB, pfkB family carbohydrate kinase 8.0e-09
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: carbohydrate pyrimidine family protein 0.0
Internal
uagpf_v2_unigene28370 uagpf v2.0 228
AutoFact: La protein 1 [Arabidopsis thaliana] gb|AAL07086.1| unknown protein [Arabidopsis thaliana] gb|AEE86109.1| La protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: la protein 1 0.0
Complete
uagpf_v2_unigene28565 uagpf v2.0 493
AutoFact: origin of replication complex 1B [Arabidopsis thaliana] emb|CAB53755.1| origin recognition complex subunit 1-like protein [Arabidopsis thaliana] emb|CAB78305.1| origin recognition complex subunit 1-like protein [Arabidopsis thaliana] emb|CAD20132.1| origi 0.0
FL-Next: tr=Origin recognition complex subunit, putative; Ricinus communis (Castor bean). 0.0
Blast2go: origin recognition complex subunit 1-like 0.0
Internal
uagpf_v2_unigene28585 uagpf v2.0 427
AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9S0U6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
C-terminus
uagpf_v2_unigene29151 uagpf v2.0 515
AutoFact: heat shock factor protein hsf8-related [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock transcription factor 1 0.0
Internal
uagpf_v2_unigene29164 uagpf v2.0 231
AutoFact: High-affinity cationic amino acid transporter 1 n=3 Tax=Andropogoneae RepID=B6U1T8_MAIZE 5.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
uagpf_v2_unigene29622 uagpf v2.0 354
AutoFact: MYB transcription factor MYB107 [Glycine max] 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb transcription factor myb107 0.0
Internal
uagpf_v2_unigene29671 uagpf v2.0 298
AutoFact: COP9 signalosome complex subunit 3 [Arabidopsis thaliana] sp|Q8W575.2|CSN3_ARATH RecName: Full=COP9 signalosome complex subunit 3; Short=Signalosome subunit 3; AltName: Full=Protein FUSCA 11 gb|AAL58102.1|AF395059_1 CSN complex subunit 3 [Arabidopsis thal 0.0
FL-Next: sp=COP9 signalosome complex subunit 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cop9 signalosome complex subunit 3 0.0
Internal
uagpf_v2_unigene29984 uagpf v2.0 278
AutoFact: Root phototropism protein, putative n=1 Tax=Ricinus communis RepID=B9SKU3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: btb poz domain-containing protein at1g30440-like 0.0
Internal
uagpf_v2_unigene30399 uagpf v2.0 198
AutoFact: O-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9S0A7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: caffeic acid 3-o-methyltransferase 0.0
Internal
uagpf_v2_unigene30651 uagpf v2.0 285
AutoFact: Histone acetyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RAZ9_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain