Sustainpine_db
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Assembly Name: uagpf v2.0

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene51502 uagpf v2.0 460
• AutoFact: [S] COG4886 Leucine-rich repeat (LRR) protein 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: leucine-rich repeat receptor-like serine threonine-protein kinase at2g24130-like 4.64639e-33
Internal
uagpf_v2_unigene51578 uagpf v2.0 329
• AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDD1_RICCO 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene51607 uagpf v2.0 433
• AutoFact: WD40 domain-containing protein [Arabidopsis thaliana] gb|AAU94425.1| At1g65030 [Arabidopsis thaliana] gb|AEE34317.1| WD40 domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: p21-activated protein kinase-interacting protein 1-like 0.0
Internal
uagpf_v2_unigene51669 uagpf v2.0 386
• AutoFact: Beta-galactosidase n=1 Tax=Picea sitchensis RepID=B8LLU8_PICSI 0.0
• FL-Next: sp=Beta-galactosidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: beta-galactosidase 1-like 0.0
Internal
uagpf_v2_unigene51700 uagpf v2.0 243
• AutoFact: WD-repeat protein GhTTG2 [Gossypium hirsutum] gb|AAM95644.1| WD-repeat protein GhTTG2 [Gossypium hirsutum] 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene51835 uagpf v2.0 287
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: at1g74600-like protein 0.0
Internal
uagpf_v2_unigene51840 uagpf v2.0 377
• AutoFact: NLE multi-domain protein 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: notchless protein homolog 0.0
Putative Complete
uagpf_v2_unigene51873 uagpf v2.0 360
• AutoFact: Receptor serine-threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RT11_RICCO 0.0
• Blast2go: protein kinase family protein 0.0
unknown
uagpf_v2_unigene51900 uagpf v2.0 400
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
uagpf_v2_unigene52086 uagpf v2.0 439
• AutoFact: peroxisomal targeting signal type 2 receptor [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: peroxin 7 0.0
C-terminus
uagpf_v2_unigene52092 uagpf v2.0 622
• AutoFact: chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] dbj|BAF34944.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gb|EEE69802.1| hypothetical protein OsJ_29535 [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=ATP-dependent DNA helicase DDM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
Putative N-terminus
uagpf_v2_unigene52334 uagpf v2.0 282
• AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 0.0
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: cellulose synthase 0.0
Internal
uagpf_v2_unigene52392 uagpf v2.0 499
• AutoFact: chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] dbj|BAF34944.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gb|EEE69802.1| hypothetical protein OsJ_29535 [Oryza sativa Japonica Group] 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
unknown
uagpf_v2_unigene52400 uagpf v2.0 468
• AutoFact: Unassigned protein
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene52458 uagpf v2.0 302
• AutoFact: THO complex subunit 3 [Arabidopsis thaliana] dbj|BAB09295.1| unnamed protein product [Arabidopsis thaliana] gb|AAM13119.1| unknown protein [Arabidopsis thaliana] gb|AAN15493.1| unknown protein [Arabidopsis thaliana] gb|AED96724.1| THO complex subunit 3 [A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tho complex subunit 3 0.0
Putative C-terminus
uagpf_v2_unigene52462 uagpf v2.0 233
• AutoFact: Unassigned protein
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 4.19833e-35
Internal
uagpf_v2_unigene52522 uagpf v2.0 383
• AutoFact: WD-repeat protein, putative 3.0e-10
• FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 1.45343e-13
Internal
uagpf_v2_unigene52534 uagpf v2.0 348
• AutoFact: WS03724.C21_C17 SS-B-N-22 Picea sitchensis cDNA clone WS03724_C17 3', mRNA sequence. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene52602 uagpf v2.0 714
• AutoFact: Fertilization-independent endosperm (Fragment) n=2 Tax=Hieracium RepID=B1ABR5_HIEPL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: fertilization-independent endosperm protein 0.0
Putative N-terminus
uagpf_v2_unigene52772 uagpf v2.0 609
• AutoFact: Endoglucanase n=2 Tax=Pinaceae RepID=A6N838_PINTA 0.0
• FL-Next: tr=Endoglucanase; Pinus taeda (Loblolly pine). 0.0
• Blast2go: membrane-anchored endo- -beta-glucanase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain