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Assembly Name: uagpf v2.0

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene50508 uagpf v2.0 309
• AutoFact: Transducin/WD-40 repeat-containing protein n=1 Tax=Arabidopsis thaliana RepID=Q680F0_ARATH 1.0e-10
unknown
uagpf_v2_unigene50530 uagpf v2.0 380
• AutoFact: cellulose synthase 6 [Eucalyptus grandis] 0.0
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: family 2 glycosyltransferase 0.0
Internal
uagpf_v2_unigene50591 uagpf v2.0 437
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene50641 uagpf v2.0 140
• AutoFact: putative WD-repeat protein [Arabidopsis thaliana] 2.0e-06
• Blast2go: protein 3.38822e-09
unknown
uagpf_v2_unigene50665 uagpf v2.0 114
• AutoFact: Periodic tryptophan protein-associated region; WD40-like [Medicago truncatula] 0.0
• Blast2go: periodic tryptophan protein 2 0.0
unknown
uagpf_v2_unigene50818 uagpf v2.0 369
• AutoFact: protein kinase family protein [Arabidopsis thaliana] sp|Q8GXZ3.1|Y5102_ARATH RecName: Full=Serine/threonine-protein kinase At5g01020 dbj|BAC42590.1| putative protein kinase [Arabidopsis thaliana] gb|AED90288.1| protein kinase family protein [Arabidopsis t 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: serine threonine-protein kinase at5g01020-like 0.0
Internal
uagpf_v2_unigene50833 uagpf v2.0 347
• AutoFact: Putative selenium-binding protein, related n=1 Tax=Solanum demissum RepID=Q6F2D0_SOLDE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene50856 uagpf v2.0 292
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene50911 uagpf v2.0 344
• AutoFact: RecName: Full=Coatomer subunit alpha-2; AltName: Full=Alpha-coat protein 2; Short=Alpha-COP 2 gb|AAK18837.1|AC082645_7 putative alpha-coat protein [Oryza sativa Japonica Group] gb|ABF98514.1| Coatomer alpha subunit, putative, expressed [Oryza sativa Japon 9.99995e-41
• FL-Next: sp=Coatomer subunit alpha-3; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: protein 3.54529e-43
Internal
uagpf_v2_unigene51062 uagpf v2.0 812
• AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 8.0e-24
• FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 9.61252e-27
Putative C-terminus
uagpf_v2_unigene51121 uagpf v2.0 539
• AutoFact: Unassigned protein
• FL-Next: sp=U3 small nucleolar RNA-associated protein 18 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: u3 small nucleolar rna-associated protein 18 homolog 0.0
C-terminus
uagpf_v2_unigene51140 uagpf v2.0 556
• AutoFact: peroxisomal targeting signal type 2 receptor [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: peroxin 7 0.0
C-terminus
uagpf_v2_unigene51182 uagpf v2.0 487
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene51246 uagpf v2.0 588
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01754.1| putative protein [Arabidopsis thaliana] gb|AAL36367.1| unknown protein [Arabidopsis thaliana] gb|AAM14196.1| unknown protein [Arabidopsis thaliana] gb|AED92176.1| transducin/ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosome biogenesis protein wdr12 homolog 0.0
N-terminus
uagpf_v2_unigene51254 uagpf v2.0 316
• AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
• Blast2go: cellulose synthase 0.0
unknown
uagpf_v2_unigene51278 uagpf v2.0 569
• AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] emb|CAC01878.1| putative protein [Arabidopsis thaliana] gb|AAM13237.1| putative protein [Arabidopsis thaliana] gb|AAM67181.1| unknown [Arabidopsis thaliana] gb|AAN65128.1| putati 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene51330 uagpf v2.0 515
• AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9T5V8_RICCO 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene51374 uagpf v2.0 611
• AutoFact: WAK-like kinase [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wall-associated receptor kinase-like 14-like 0.0
Putative C-terminus
uagpf_v2_unigene51406 uagpf v2.0 449
• AutoFact: pfam00400, WD40, WD domain, G-beta repeat 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcriptional corepressor leunig 0.0
Complete
uagpf_v2_unigene51468 uagpf v2.0 608
• AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAM13156.1| unknown protein [Arabidopsis thaliana] gb|AAN15609.1| unknown protein [Arabidopsis thaliana] gb|AEE29984.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transducin family protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain