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Assembly Name: uagpf v2.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene20434 uagpf v2.0 1982
AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 0.0
FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: s-adenosylmethionine decarboxylase proenzyme 0.0
Complete
uagpf_v2_unigene20448 uagpf v2.0 975
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
Blast2go: retrotransposon unclassified 0.0
unknown
uagpf_v2_unigene20449 uagpf v2.0 1626
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
uagpf_v2_unigene20452 uagpf v2.0 767
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative C-terminus
uagpf_v2_unigene20454 uagpf v2.0 1774
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Complete
uagpf_v2_unigene20457 uagpf v2.0 516
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
Blast2go: retrotransposon unclassified 0.0
Putative coding
uagpf_v2_unigene20462 uagpf v2.0 1025
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Complete
uagpf_v2_unigene20464 uagpf v2.0 910
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative Complete
uagpf_v2_unigene20470 uagpf v2.0 349
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 8.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.96182e-44
Putative Complete
uagpf_v2_unigene20471 uagpf v2.0 911
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
unknown
uagpf_v2_unigene20546 uagpf v2.0 959
AutoFact: Unassigned protein
Blast2go: prolyl 4-hydroxylase subunit alpha-1 0.0
Putative coding
uagpf_v2_unigene24979 uagpf v2.0 381
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RVQ4_RICCO 6.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 5.21803e-27
Internal
uagpf_v2_unigene25019 uagpf v2.0 508
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
Blast2go: retrotransposon unclassified 0.0
unknown
uagpf_v2_unigene25333 uagpf v2.0 655
AutoFact: DNA replication licensing factor MCM3 homolog 1 n=9 Tax=Poaceae RepID=MCM31_MAIZE 0.0
FL-Next: sp=DNA replication licensing factor MCM3 homolog 3; Zea mays (Maize). 0.0
Blast2go: dna replication licensing factor mcm3 homolog 1-like 0.0
Internal
uagpf_v2_unigene25369 uagpf v2.0 715
AutoFact: Dynamin central region; Dynamin GTPase effector [Medicago truncatula] 0.0
Blast2go: dynamin-related protein 3a-like 0.0
unknown
uagpf_v2_unigene25581 uagpf v2.0 340
AutoFact: LOB domain-containing protein 15 [Arabidopsis thaliana] sp|Q8L5T5.2|LBD15_ARATH RecName: Full=LOB domain-containing protein 15; AltName: Full=ASYMMETRIC LEAVES 2-like protein 11; Short=AS2-like protein 11 gb|AAL38034.1|AF447889_1 LOB DOMAIN 15 [Arabidopsi 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lob domain-containing protein 2.66247e-44
C-terminus
uagpf_v2_unigene25783 uagpf v2.0 592
AutoFact: RVT_2 domain containing protein 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
C-terminus
uagpf_v2_unigene25795 uagpf v2.0 407
AutoFact: Mutant gag-pol polyprotein n=2 Tax=Pisum sativum RepID=E7BQD6_PEA 4.0e-29
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: gag-pol polyprotein 6.24199e-34
C-terminus
uagpf_v2_unigene25910 uagpf v2.0 408
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
uagpf_v2_unigene26185 uagpf v2.0 530
AutoFact: syntaxin of plants 31 [Arabidopsis thaliana] 0.0
FL-Next: sp=Syntaxin-31; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: syntaxin of plants 31 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain