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Assembly Name: uagpf v2.0

Name: chromatin remodeling

Term: GO:0006338  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene121 uagpf v2.0 374
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: long-chain-fatty-acid-- ligase 3 5.03865e-17
C-terminus
uagpf_v2_unigene3758 uagpf v2.0 836
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SUQ2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: global transcription factor group 0.0
N-terminus
uagpf_v2_unigene14529 uagpf v2.0 565
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
Blast2go: dna topoisomerase 1 1.4013e-45
unknown
uagpf_v2_unigene14950 uagpf v2.0 581
AutoFact: Predicted protein n=2 Tax=Hordeum vulgare RepID=F2E947_HORVD 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gaga-binding transcriptional activator 0.0
C-terminus
uagpf_v2_unigene16179 uagpf v2.0 1585
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
FL-Next: sp=DNA topoisomerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna topoisomerase 1 1.4013e-45
N-terminus
uagpf_v2_unigene27650 uagpf v2.0 469
AutoFact: SNF5 homolog BSH [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin structure-remodeling complex protein bsh 0.0
C-terminus
uagpf_v2_unigene28894 uagpf v2.0 328
AutoFact: probable histone deacetylase 19 [Zea mays] gb|AAP92528.1|AF322918_1 HDA1 [Zea mays] 0.0
FL-Next: sp=Histone deacetylase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 0.0
N-terminus
uagpf_v2_unigene29297 uagpf v2.0 243
AutoFact: SNF5 homolog BSH [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin structure-remodeling complex protein bsh 0.0
Internal
uagpf_v2_unigene30902 uagpf v2.0 541
AutoFact: Actin related protein n=1 Tax=Populus trichocarpa RepID=B9IMW6_POPTR 2.0e-31
FL-Next: sp=Actin-related protein 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: actin-related protein 6 2.8125e-36
C-terminus
uagpf_v2_unigene34696 uagpf v2.0 302
AutoFact: probable histone deacetylase 19 [Zea mays] gb|AAP92528.1|AF322918_1 HDA1 [Zea mays] 0.0
FL-Next: sp=Histone deacetylase 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 0.0
Internal
uagpf_v2_unigene35992 uagpf v2.0 668
AutoFact: Actin related protein n=1 Tax=Populus trichocarpa RepID=B9IMW6_POPTR 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin-related protein 6 3.17408e-36
C-terminus
uagpf_v2_unigene36315 uagpf v2.0 428
AutoFact: Predicted protein n=2 Tax=Hordeum vulgare RepID=F2E947_HORVD 3.00004e-41
Blast2go: gaga-binding transcriptional activator 0.0
unknown
uagpf_v2_unigene36349 uagpf v2.0 381
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
Blast2go: dna topoisomerase 1 1.4013e-45
Coding
uagpf_v2_unigene37534 uagpf v2.0 422
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
Blast2go: dna topoisomerase 1 1.4013e-45
Coding
uagpf_v2_unigene37683 uagpf v2.0 395
AutoFact: SNF5 homolog BSH [Arabidopsis thaliana] 0.0
Blast2go: chromatin structure-remodeling complex protein bsh 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain