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Assembly Name: uagpf v2.0

Name: transcription from plastid promoter

Term: GO:0042793  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene623 uagpf v2.0 202
• AutoFact: plastid transcriptionally active 12 [Arabidopsis thaliana] gb|AEC09002.1| plastid transcriptionally active 12 [Arabidopsis thaliana] 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: plastid transcriptionally active 12 0.0
N-terminus
uagpf_v2_unigene26133 uagpf v2.0 256
• AutoFact: plastid transcriptionally active 6 [Arabidopsis thaliana] ref|NP_001031076.1| plastid transcriptionally active 6 [Arabidopsis thaliana] gb|AAD41412.1|AC007727_1 EST gb|N95925 comes from this gene [Arabidopsis thaliana] gb|AAG40066.1|AF324715_1 At1g21600 [ 0.0
• Blast2go: plastid transcriptionally active 6 0.0
unknown
uagpf_v2_unigene28879 uagpf v2.0 381
• AutoFact: plastid transcriptionally active 6 [Arabidopsis thaliana] ref|NP_001031076.1| plastid transcriptionally active 6 [Arabidopsis thaliana] gb|AAD41412.1|AC007727_1 EST gb|N95925 comes from this gene [Arabidopsis thaliana] gb|AAG40066.1|AF324715_1 At1g21600 [ 0.0
• FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: plastid transcriptionally active 6 0.0
Internal
uagpf_v2_unigene30750 uagpf v2.0 338
• AutoFact: plastid transcriptionally active 2 [Arabidopsis thaliana] sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor gb|AAD55291.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene30941 uagpf v2.0 421
• AutoFact: plastid transcriptionally active 12 [Arabidopsis thaliana] gb|AEC09002.1| plastid transcriptionally active 12 [Arabidopsis thaliana] 3.0e-22
• Blast2go: plastid transcriptionally active 12 4.93397e-42
Coding
uagpf_v2_unigene35871 uagpf v2.0 93
• AutoFact: plastid transcriptionally active 6 [Arabidopsis thaliana] ref|NP_001031076.1| plastid transcriptionally active 6 [Arabidopsis thaliana] gb|AAD41412.1|AC007727_1 EST gb|N95925 comes from this gene [Arabidopsis thaliana] gb|AAG40066.1|AF324715_1 At1g21600 [ 0.0
• Blast2go: plastid transcriptionally active 6 0.0
unknown
uagpf_v2_unigene39097 uagpf v2.0 336
• AutoFact: plastid transcriptionally active 2 [Arabidopsis thaliana] sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor gb|AAD55291.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene39918 uagpf v2.0 372
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R902_RICCO 4.0e-39
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 1.4013e-45
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain