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Assembly Name: uagpf v2.0

Name: RNA interference

Term: GO:0016246  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1639 uagpf v2.0 1409
AutoFact: AGO1-2 (Fragment) n=1 Tax=Nicotiana benthamiana RepID=Q2LFC3_NICBE 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: protein argonaute 0.0
Internal
uagpf_v2_unigene6391 uagpf v2.0 575
AutoFact: AGO1-2 (Fragment) n=1 Tax=Nicotiana benthamiana RepID=Q2LFC3_NICBE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein argonaute 0.0
C-terminus
uagpf_v2_unigene7991 uagpf v2.0 932
AutoFact: AGO1-2 (Fragment) n=1 Tax=Nicotiana benthamiana RepID=Q2LFC3_NICBE 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: protein argonaute 0.0
Putative N-terminus
uagpf_v2_unigene16844 uagpf v2.0 823
AutoFact: AGO1-2 (Fragment) n=1 Tax=Nicotiana benthamiana RepID=Q2LFC3_NICBE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein argonaute 0.0
Putative Complete
uagpf_v2_unigene25748 uagpf v2.0 616
AutoFact: AGO1-2 (Fragment) n=1 Tax=Nicotiana benthamiana RepID=Q2LFC3_NICBE 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: protein argonaute 0.0
Putative N-terminus
uagpf_v2_unigene30516 uagpf v2.0 345
AutoFact: Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9IEP4_POPTR 2.0e-09
FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 2 1.16796e-13
Internal
uagpf_v2_unigene31530 uagpf v2.0 292
AutoFact: DNA-directed RNA polymerase n=4 Tax=Oryza sativa RepID=B9G500_ORYSJ 8.0e-19
FL-Next: sp=DNA-directed RNA polymerase D subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nuclear rna polymerase d1a 1.55727e-21
Internal
uagpf_v2_unigene37920 uagpf v2.0 492
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9RC12_RICCO 2.0e-23
FL-Next: sp=DNA-directed RNA polymerase D subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nuclear rna polymerase d1a 2.40036e-26
Internal
uagpf_v2_unigene42434 uagpf v2.0 275
AutoFact: Eukaryotic translation initiation factor 2c, putative n=1 Tax=Ricinus communis RepID=B9SJV6_RICCO 2.0e-38
FL-Next: sp=Protein argonaute 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein argonaute 3.22299e-44
Internal
uagpf_v2_unigene50984 uagpf v2.0 221
AutoFact: Nonsense-mediated mRNA decay protein, putative n=2 Tax=Malpighiales RepID=B9SS25_RICCO 2.0e-36
Blast2go: regulator of nonsense transcripts 1 homolog 2.71858e-40
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain