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Assembly Name: uagpf v2.0

Name: spliceosomal complex

Term: GO:0005681  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene5180 uagpf v2.0 1028
AutoFact: mRNA splicing factor, thioredoxin-like U5 snRNP [Arabidopsis thaliana] gb|AAS49089.1| At3g24730 [Arabidopsis thaliana] gb|AEE76940.1| mRNA splicing factor, thioredoxin-like U5 snRNP [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thioredoxin-like protein 4b 0.0
Complete
uagpf_v2_unigene5649 uagpf v2.0 723
AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-processing-splicing factor 8-like 0.0
C-terminus
uagpf_v2_unigene9316 uagpf v2.0 771
AutoFact: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Arabidopsis thaliana] sp|O22212.1|PRP4_ARATH RecName: Full=U4/U6 small nuclear ribonucleoprotein PRP4-like protein; AltName: Full=Protein EMBRYO DEFECTIVE 2776 gb|AAB84332.1| putative small nuclear 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u4 u6 small nuclear ribonucleoprotein prp4-like 0.0
Putative N-terminus
uagpf_v2_unigene14950 uagpf v2.0 581
AutoFact: Predicted protein n=2 Tax=Hordeum vulgare RepID=F2E947_HORVD 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gaga-binding transcriptional activator 0.0
C-terminus
uagpf_v2_unigene17005 uagpf v2.0 573
AutoFact: splicing factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine serine-rich-splicing factor rsp31-like 0.0
Putative Complete
uagpf_v2_unigene35674 uagpf v2.0 221
AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-processing-splicing factor 8-like 0.0
Internal
uagpf_v2_unigene36315 uagpf v2.0 428
AutoFact: Predicted protein n=2 Tax=Hordeum vulgare RepID=F2E947_HORVD 3.00004e-41
Blast2go: gaga-binding transcriptional activator 0.0
unknown
uagpf_v2_unigene37330 uagpf v2.0 415
AutoFact: Potassium channel regulatory factor, putative n=1 Tax=Ricinus communis RepID=B9S407_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pre-mrna-splicing factor 18-like 0.0
Internal
uagpf_v2_unigene39727 uagpf v2.0 255
AutoFact: Potassium channel regulatory factor, putative n=1 Tax=Ricinus communis RepID=B9S407_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: pre-mrna-splicing factor 18-like 0.0
Internal
uagpf_v2_unigene43458 uagpf v2.0 436
AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein Sb10g004680; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: pre-mrna-processing-splicing factor 8-like 0.0
Internal
uagpf_v2_unigene43735 uagpf v2.0 340
AutoFact: putative splicing factor Prp8 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Pre-mRNA-processing-splicing factor, putative; Ricinus communis (Castor bean). 0.0
Blast2go: pre-mrna-processing-splicing factor 0.0
Internal
uagpf_v2_unigene46461 uagpf v2.0 350
AutoFact: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Arabidopsis thaliana] sp|O22212.1|PRP4_ARATH RecName: Full=U4/U6 small nuclear ribonucleoprotein PRP4-like protein; AltName: Full=Protein EMBRYO DEFECTIVE 2776 gb|AAB84332.1| putative small nuclear 0.0
FL-Next: sp=U4/U6 small nuclear ribonucleoprotein PRP4-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: u4 u6 small nuclear ribonucleoprotein prp4-like 0.0
Internal
uagpf_v2_unigene54960 uagpf v2.0 389
AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
Blast2go: arginine serine-rich-splicing factor rsp40-like 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain