Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: mRNA polyadenylation

Term: GO:0006378  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1253 uagpf v2.0 1222
AutoFact: PCF11P-similar protein 4 [Arabidopsis thaliana] dbj|BAF00997.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82437.1| PCF11P-similar protein 4 [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
Coding
uagpf_v2_unigene2495 uagpf v2.0 229
AutoFact: PCF11P-similar protein 4 [Arabidopsis thaliana] dbj|BAF00997.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82437.1| PCF11P-similar protein 4 [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene2768 uagpf v2.0 879
AutoFact: cleavage and polyadenylation specificity factor subunit 2 [Arabidopsis thaliana] sp|Q9LKF9.2|CPSF2_ARATH RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: cleavage and polyadenylation specificity factor 0.0
C-terminus
uagpf_v2_unigene2957 uagpf v2.0 814
AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 0.0
N-terminus
uagpf_v2_unigene3584 uagpf v2.0 664
AutoFact: cleavage and polyadenylation specificity factor subunit 2 [Arabidopsis thaliana] sp|Q9LKF9.2|CPSF2_ARATH RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cleavage and polyadenylation specificity factor 0.0
N-terminus
uagpf_v2_unigene3961 uagpf v2.0 1447
AutoFact: contains similarity to human PCF11p homolog (GB:AF046935) [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
Coding
uagpf_v2_unigene6023 uagpf v2.0 962
AutoFact: cleavage and polyadenylation specificity factor subunit 2 [Arabidopsis thaliana] sp|Q9LKF9.2|CPSF2_ARATH RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: cleavage and polyadenylation specificity factor 0.0
Internal
uagpf_v2_unigene11126 uagpf v2.0 895
AutoFact: PREDICTED: similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1) isoform 17 [Canis familiaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly binding cytoplasmic 1 0.0
Internal
uagpf_v2_unigene14649 uagpf v2.0 657
AutoFact: cleavage and polyadenylation specificity factor subunit 3-I [Arabidopsis thaliana] ref|NP_849835.1| cleavage and polyadenylation specificity factor subunit 3-I [Arabidopsis thaliana] ref|NP_001031215.1| cleavage and polyadenylation specificity factor subu 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cleavage and polyadenylation specificity factor subunit 3-i 0.0
C-terminus
uagpf_v2_unigene15847 uagpf v2.0 662
AutoFact: RecName: Full=Probable cleavage and polyadenylation specificity factor subunit 1; AltName: Full=Cleavage and polyadenylation specificity factor 160 kDa subunit; Short=CPSF 160 kDa subunit emb|CAD39979.2| OSJNBa0032B23.5 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cleavage and polyadenylation specificity factor subunit 1-like 0.0
C-terminus
uagpf_v2_unigene18227 uagpf v2.0 683
AutoFact: PREDICTED: similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1) isoform 17 [Canis familiaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly binding cytoplasmic 1 0.0
C-terminus
uagpf_v2_unigene25206 uagpf v2.0 398
AutoFact: contains similarity to human PCF11p homolog (GB:AF046935) [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene25788 uagpf v2.0 521
AutoFact: contains similarity to human PCF11p homolog (GB:AF046935) [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene29669 uagpf v2.0 75
AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
Blast2go: flowering time control protein fpa 0.0
unknown
uagpf_v2_unigene30709 uagpf v2.0 481
AutoFact: PREDICTED: similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1) isoform 17 [Canis familiaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly binding cytoplasmic 1 0.0
Putative N-terminus
uagpf_v2_unigene32620 uagpf v2.0 240
AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
Blast2go: flowering time control protein fpa 0.0
Coding
uagpf_v2_unigene33930 uagpf v2.0 254
AutoFact: contains similarity to human PCF11p homolog (GB:AF046935) [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene36552 uagpf v2.0 318
AutoFact: contains similarity to human PCF11p homolog (GB:AF046935) [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
Coding
uagpf_v2_unigene40031 uagpf v2.0 265
AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 0.0
Internal
uagpf_v2_unigene48074 uagpf v2.0 293
AutoFact: PREDICTED: similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1) isoform 17 [Canis familiaris] 0.0
Blast2go: poly binding cytoplasmic 1 0.0
Coding

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain