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Assembly Name: uagpf v2.0

Name: secondary cell wall biogenesis

Term: GO:0009834  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1871 uagpf v2.0 943
AutoFact: NAC domain protein, IPR003441 n=2 Tax=Populus trichocarpa RepID=A9PDI0_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
N-terminus
uagpf_v2_unigene2523 uagpf v2.0 503
AutoFact: glycoprotein-specific UDP-glucuronyltransferase-like protein [Arabidopsis thaliana] 0.0
Blast2go: glycosyltransferase irx9-like protein 0.0
unknown
uagpf_v2_unigene2585 uagpf v2.0 294
AutoFact: Lustrin A-like n=4 Tax=Oryza sativa RepID=Q69T67_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lustrin a-like 0.0
Internal
uagpf_v2_unigene3287 uagpf v2.0 559
AutoFact: Lustrin A-like n=4 Tax=Oryza sativa RepID=Q69T67_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lustrin a-like 0.0
C-terminus
uagpf_v2_unigene3331 uagpf v2.0 677
AutoFact: glycoprotein-specific UDP-glucuronyltransferase-like protein [Arabidopsis thaliana] 0.0
Blast2go: glycosyltransferase irx9-like protein 0.0
Putative coding
uagpf_v2_unigene4510 uagpf v2.0 1311
AutoFact: Exostosin family protein [Arabidopsis thaliana] sp|Q940Q8.1|IX10L_ARATH RecName: Full=Probable beta-1,4-xylosyltransferase IRX10L; AltName: Full=Glucuronoxylan glucuronosyltransferase 1; Short=AtGUT1; AltName: Full=Glucuronoxylan glucuronosyltransferase 2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable beta- -xylosyltransferase irx10l-like 0.0
N-terminus
uagpf_v2_unigene8273 uagpf v2.0 586
AutoFact: Lustrin A-like n=4 Tax=Oryza sativa RepID=Q69T67_ORYSJ 0.0
Blast2go: lustrin a-like 0.0
Coding
uagpf_v2_unigene9333 uagpf v2.0 734
AutoFact: transferase, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable glucuronoxylan glucuronosyltransferase irx7-like 0.0
C-terminus
uagpf_v2_unigene10699 uagpf v2.0 794
AutoFact: DUF579 domain containing protein 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
uagpf_v2_unigene14448 uagpf v2.0 957
AutoFact: Exostosin family protein [Arabidopsis thaliana] sp|Q940Q8.1|IX10L_ARATH RecName: Full=Probable beta-1,4-xylosyltransferase IRX10L; AltName: Full=Glucuronoxylan glucuronosyltransferase 1; Short=AtGUT1; AltName: Full=Glucuronoxylan glucuronosyltransferase 2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable beta- -xylosyltransferase irx10l-like 0.0
C-terminus
uagpf_v2_unigene16896 uagpf v2.0 502
AutoFact: transferase, putative 0.0
Blast2go: probable glucuronoxylan glucuronosyltransferase irx7-like 0.0
unknown
uagpf_v2_unigene17202 uagpf v2.0 757
AutoFact: nucleotide-diphospho-sugar transferase domain-containing protein [Arabidopsis thaliana] ref|NP_564290.2| nucleotide-diphospho-sugar transferase domain-containing protein [Arabidopsis thaliana] sp|Q9SXC4.2|IRX9H_ARATH RecName: Full=Probable beta-1,4-xylosy 0.0
Blast2go: beta- - 0.0
unknown
uagpf_v2_unigene18070 uagpf v2.0 874
AutoFact: small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] ref|NP_849414.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] ref|NP_001031682.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: small nuclear ribonucleoprotein associated protein b 8.18162e-41
N-terminus
uagpf_v2_unigene19035 uagpf v2.0 949
AutoFact: transferase, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable glucuronoxylan glucuronosyltransferase irx7-like 0.0
N-terminus
uagpf_v2_unigene19538 uagpf v2.0 1771
AutoFact: NAC domain protein, IPR003441 n=2 Tax=Populus trichocarpa RepID=A9PDI0_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
Complete
uagpf_v2_unigene19670 uagpf v2.0 435
AutoFact: NAC domain protein, IPR003441 n=2 Tax=Populus trichocarpa RepID=A9PDI0_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
N-terminus
uagpf_v2_unigene28647 uagpf v2.0 673
AutoFact: nucleotide-diphospho-sugar transferase domain-containing protein [Arabidopsis thaliana] ref|NP_564290.2| nucleotide-diphospho-sugar transferase domain-containing protein [Arabidopsis thaliana] sp|Q9SXC4.2|IRX9H_ARATH RecName: Full=Probable beta-1,4-xylosy 0.0
FL-Next: sp=Probable beta-1,4-xylosyltransferase IRX9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: beta- - 0.0
N-terminus
uagpf_v2_unigene33686 uagpf v2.0 320
AutoFact: Auxin-induced protein 5NG4 n=1 Tax=Pinus taeda RepID=5NG4_PINTA 0.0
FL-Next: sp=Auxin-induced protein 5NG4; Pinus taeda (Loblolly pine). 0.0
Blast2go: auxin-induced protein 5ng4-like 0.0
Internal
uagpf_v2_unigene38505 uagpf v2.0 376
AutoFact: Protein COBRA, putative n=1 Tax=Ricinus communis RepID=B9RLK9_RICCO 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein cobra 4.4281e-42
N-terminus
uagpf_v2_unigene39341 uagpf v2.0 390
AutoFact: Nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] dbj|BAB09073.1| nodulin-like protein [Arabidopsis thaliana] gb|AED95523.1| Nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin-induced protein 5ng4-like 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain