Sustainpine_db
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Assembly Name: uagpf v2.0

Name: red light signaling pathway

Term: GO:0010161  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene183 uagpf v2.0 373
• AutoFact: putative protein phosphatase 2C 9 [Arabidopsis thaliana] sp|Q9LME4.1|P2C09_ARATH RecName: Full=Probable protein phosphatase 2C 9; Short=AtPP2C09; AltName: Full=Phytochrome-associated protein phosphatase 2C; Short=PAPP2C gb|AAF87263.1|AC068562_10 Strong si 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein phosphatase 0.0
C-terminus
uagpf_v2_unigene2067 uagpf v2.0 634
• AutoFact: Two-component response regulator ARR3 n=3 Tax=Arabidopsis RepID=ARR3_ARATH 3.0e-22
• FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
• Blast2go: two-component sensor protein histidine protein 7.69687e-27
N-terminus
uagpf_v2_unigene5844 uagpf v2.0 1329
• AutoFact: Type A response regulator RR1 n=1 Tax=Phaseolus vulgaris RepID=B0YGG5_PHAVU 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: type a response regulator 0.0
Complete
uagpf_v2_unigene7535 uagpf v2.0 601
• AutoFact: Protein phosphatase 2C-like [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable protein phosphatase 2c 10-like 0.0
C-terminus
uagpf_v2_unigene7830 uagpf v2.0 592
• AutoFact: putative protein phosphatase 2C 9 [Arabidopsis thaliana] sp|Q9LME4.1|P2C09_ARATH RecName: Full=Probable protein phosphatase 2C 9; Short=AtPP2C09; AltName: Full=Phytochrome-associated protein phosphatase 2C; Short=PAPP2C gb|AAF87263.1|AC068562_10 Strong si 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein phosphatase 0.0
Putative Complete
uagpf_v2_unigene11044 uagpf v2.0 567
• AutoFact: Response regulator 1 n=1 Tax=Pinus pinea RepID=C0LLL0_PINPI 3.0e-30
• FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
• Blast2go: type-a response regulator 1.2697e-38
Putative N-terminus
uagpf_v2_unigene26459 uagpf v2.0 245
• AutoFact: putative protein phosphatase 2C 9 [Arabidopsis thaliana] sp|Q9LME4.1|P2C09_ARATH RecName: Full=Probable protein phosphatase 2C 9; Short=AtPP2C09; AltName: Full=Phytochrome-associated protein phosphatase 2C; Short=PAPP2C gb|AAF87263.1|AC068562_10 Strong si 0.0
• Blast2go: protein phosphatase 0.0
unknown
uagpf_v2_unigene37862 uagpf v2.0 409
• AutoFact: putative protein phosphatase 2C 9 [Arabidopsis thaliana] sp|Q9LME4.1|P2C09_ARATH RecName: Full=Probable protein phosphatase 2C 9; Short=AtPP2C09; AltName: Full=Phytochrome-associated protein phosphatase 2C; Short=PAPP2C gb|AAF87263.1|AC068562_10 Strong si 0.0
• Blast2go: protein phosphatase 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain