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Assembly Name: uagpf v2.0

Name: cytosolic large ribosomal subunit

Term: GO:0022625  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene18048 uagpf v2.0 578
AutoFact: 60S ribosomal protein L38, putative n=1 Tax=Ricinus communis RepID=B9RM38_RICCO 5.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l38 6.16412e-40
Complete
uagpf_v2_unigene18316 uagpf v2.0 479
AutoFact: similar to 60S ribosomal protein L35 [Solanum lycopersicum] 8.99634e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l35 0.0
Complete
uagpf_v2_unigene18563 uagpf v2.0 474
AutoFact: similar to 60S ribosomal protein L35 [Solanum lycopersicum] 8.99634e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l35 0.0
C-terminus
uagpf_v2_unigene18799 uagpf v2.0 1003
AutoFact: ribosomal protein L7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l7 0.0
Complete
uagpf_v2_unigene18831 uagpf v2.0 892
AutoFact: 60S ribosomal protein L27 n=2 Tax=Picea sitchensis RepID=A9NQ84_PICSI 0.0
FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l27 0.0
Complete
uagpf_v2_unigene19089 uagpf v2.0 1009
AutoFact: 60S ribosomal protein L21 n=9 Tax=Poaceae RepID=Q9AV87_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l21 0.0
Complete
uagpf_v2_unigene19236 uagpf v2.0 573
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin fusion protein 0.0
Complete
uagpf_v2_unigene19273 uagpf v2.0 714
AutoFact: 60S ribosomal protein L11-1 n=51 Tax=Embryophyta RepID=RL111_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l11 0.0
C-terminus
uagpf_v2_unigene19299 uagpf v2.0 1244
AutoFact: 60S ribosomal protein L6 n=3 Tax=Picea sitchensis RepID=A9NLS7_PICSI 0.0
FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l6 0.0
Complete
uagpf_v2_unigene19581 uagpf v2.0 896
AutoFact: 60S ribosomal protein L35a-1 n=16 Tax=rosids RepID=R35A1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l35a 0.0
Complete
uagpf_v2_unigene19759 uagpf v2.0 947
AutoFact: 60S ribosomal protein L23 n=41 Tax=Embryophyta RepID=RL23_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l23 0.0
Complete
uagpf_v2_unigene20527 uagpf v2.0 659
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin a-52 residue ribosomal protein fusion product 1 0.0
Complete
uagpf_v2_unigene26416 uagpf v2.0 313
AutoFact: similar to 60S ribosomal protein L35 [Solanum lycopersicum] 8.99634e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l35 0.0
N-terminus
uagpf_v2_unigene28055 uagpf v2.0 615
AutoFact: Actin-related protein 2 n=4 Tax=Poaceae RepID=ARP2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin related protein 2 0.0
Internal
uagpf_v2_unigene29854 uagpf v2.0 190
AutoFact: RecName: Full=50S ribosomal protein L5, chloroplastic pdb|3BBO|H Chain H, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l5 0.0
Internal
uagpf_v2_unigene31789 uagpf v2.0 555
AutoFact: 60S ribosomal protein L6 n=3 Tax=Picea sitchensis RepID=A9NLS7_PICSI 0.0
FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l6 0.0
C-terminus
uagpf_v2_unigene33610 uagpf v2.0 244
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
Blast2go: ubiquitin a-52 residue ribosomal protein fusion product 1 0.0
unknown
uagpf_v2_unigene36375 uagpf v2.0 598
AutoFact: RecName: Full=50S ribosomal protein L5, chloroplastic pdb|3BBO|H Chain H, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l5 0.0
Internal
uagpf_v2_unigene36642 uagpf v2.0 458
AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 1.4013e-45
Blast2go: large subunit ribosomal protein l24e 0.0
Putative coding
uagpf_v2_unigene38706 uagpf v2.0 417
AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 1.4013e-45
Blast2go: large subunit ribosomal protein l24e 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain