|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
uagpf_v2_unigene1519
|
uagpf v2.0
|
650
|
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=9 Tax=Oryza sativa RepID=Q109L4_ORYSJ
|
5.0e-15
|
|
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco).
|
0.0
|
|
• Blast2go: copia partial
|
1.08822e-18
|
|
C-terminus
|
|
uagpf_v2_unigene2687
|
uagpf v2.0
|
495
|
|
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Putative C-terminus
|
|
uagpf_v2_unigene2804
|
uagpf v2.0
|
464
|
|
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TKE6_VITVI
|
3.0e-25
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein breast cancer susceptibility 1 homolog
|
1.18593e-28
|
|
Putative N-terminus
|
|
uagpf_v2_unigene3824
|
uagpf v2.0
|
400
|
|
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Putative coding
|
|
uagpf_v2_unigene4636
|
uagpf v2.0
|
659
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Putative Complete
|
|
uagpf_v2_unigene7605
|
uagpf v2.0
|
721
|
|
• AutoFact: [L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)
|
5.0e-13
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
|
uagpf_v2_unigene8409
|
uagpf v2.0
|
860
|
|
• AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAB82685.1| putative protein [Arabidopsis thaliana] dbj|BAE98596.1| hypothetical protein [Arabidopsis thaliana] gb|ABK32189.1| At3g60810 [Arabidopsis thaliana] gb|AEE80110.1| uncharacterized protein [Arab
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: uncharacterized protein
|
0.0
|
|
C-terminus
|
|
uagpf_v2_unigene8810
|
uagpf v2.0
|
429
|
|
• AutoFact: BRCA1/BRCA2-containing complex subunit 3 [Arabidopsis thaliana] gb|AEE74463.1| BRCA1/BRCA2-containing complex subunit 3 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: brca1 brca2-containing complex subunit 3
|
0.0
|
|
N-terminus
|
|
uagpf_v2_unigene10165
|
uagpf v2.0
|
264
|
|
• AutoFact: pfam00665, rve, Integrase core domain
|
5.0e-12
|
|
• FL-Next: tr=Gag-pol polyprotein, putative; Asparagus officinalis (Garden asparagus).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
C-terminus
|
|
uagpf_v2_unigene11948
|
uagpf v2.0
|
970
|
|
• AutoFact: DNA repair protein RAD51 homolog n=1 Tax=Solanum lycopersicum RepID=RAD51_SOLLC
|
0.0
|
|
• FL-Next: sp=DNA repair protein RAD51 homolog B; Zea mays (Maize).
|
0.0
|
|
• Blast2go: dna repair protein rad51 homolog
|
0.0
|
|
C-terminus
|
|
uagpf_v2_unigene13552
|
uagpf v2.0
|
481
|
|
• AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dna mismatch repair protein
|
0.0
|
|
C-terminus
|
|
uagpf_v2_unigene14967
|
uagpf v2.0
|
381
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
N-terminus
|
|
uagpf_v2_unigene17800
|
uagpf v2.0
|
1162
|
|
• AutoFact: DNA repair protein recA-like 3 [Arabidopsis thaliana] sp|Q9ZUP2.2|RECA3_ARATH RecName: Full=DNA repair protein recA homolog 3, mitochondrial; AltName: Full=Recombinase A homolog 3; Flags: Precursor gb|ABM06015.1| At2g19490 [Arabidopsis thaliana] gb|AEC068
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dna repair protein reca homolog mitochondrial-like
|
0.0
|
|
C-terminus
|
|
uagpf_v2_unigene19962
|
uagpf v2.0
|
621
|
|
• AutoFact: BRCA1/BRCA2-containing complex subunit 3 [Arabidopsis thaliana] gb|AEE74463.1| BRCA1/BRCA2-containing complex subunit 3 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: brca1 brca2-containing complex subunit 3
|
0.0
|
|
C-terminus
|
|
uagpf_v2_unigene27571
|
uagpf v2.0
|
434
|
|
• AutoFact: DNA polymerase theta subunit [Arabidopsis thaliana] dbj|BAD93700.1| helicase and polymerase containing protein TEBICHI [Arabidopsis thaliana] gb|AEE86105.1| DNA polymerase theta subunit [Arabidopsis thaliana]
|
7.0e-09
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
• Blast2go: DNA polymerase theta subunit
|
2.55406e-11
|
|
C-terminus
|
|
uagpf_v2_unigene29241
|
uagpf v2.0
|
321
|
|
• AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAB82685.1| putative protein [Arabidopsis thaliana] dbj|BAE98596.1| hypothetical protein [Arabidopsis thaliana] gb|ABK32189.1| At3g60810 [Arabidopsis thaliana] gb|AEE80110.1| uncharacterized protein [Arab
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: uncharacterized protein
|
0.0
|
|
N-terminus
|
|
uagpf_v2_unigene29996
|
uagpf v2.0
|
407
|
|
• AutoFact: DNA repair protein recA-like 3 [Arabidopsis thaliana] sp|Q9ZUP2.2|RECA3_ARATH RecName: Full=DNA repair protein recA homolog 3, mitochondrial; AltName: Full=Recombinase A homolog 3; Flags: Precursor gb|ABM06015.1| At2g19490 [Arabidopsis thaliana] gb|AEC068
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dna repair protein reca homolog mitochondrial-like
|
0.0
|
|
Internal
|
|
uagpf_v2_unigene31158
|
uagpf v2.0
|
206
|
|
• AutoFact: DNA helicase recq1, putative n=1 Tax=Ricinus communis RepID=B9S1J8_RICCO
|
0.0
|
|
• Blast2go: atp-dependent dna helicase q-like 2
|
0.0
|
|
Coding
|
|
uagpf_v2_unigene34327
|
uagpf v2.0
|
238
|
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QYR7_ORYSJ
|
9.0e-10
|
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00300; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
1.74658e-09
|
|
Putative C-terminus
|
|
uagpf_v2_unigene35656
|
uagpf v2.0
|
287
|
|
• AutoFact: BRCA1/BRCA2-containing complex subunit 3 [Arabidopsis thaliana] gb|AEE74463.1| BRCA1/BRCA2-containing complex subunit 3 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: brca1 brca2-containing complex subunit 3
|
0.0
|
|
Internal
|
