Sustainpine_db
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Assembly Name: uagpf v2.0

Name: DNA mediated transformation

Term: GO:0009294  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene16225 uagpf v2.0 1212
• AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SGL2_RICCO 0.0
• FL-Next: tr=Global transcription factor group; subsp. trichocarpa). 0.0
• Blast2go: global transcription factor group e4 0.0
N-terminus
uagpf_v2_unigene17587 uagpf v2.0 794
• AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NTX3_PICSI 4.06377e-44
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h2a 0.0
Complete
uagpf_v2_unigene25014 uagpf v2.0 436
• AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MYK9_POPTR 0.0
• Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
unknown
uagpf_v2_unigene25597 uagpf v2.0 387
• AutoFact: Cellulose synthase-like A1 n=2 Tax=Pinaceae RepID=A3QT94_PINTA 0.0
• FL-Next: tr=Cellulose synthase-like A1; Pinus taeda (Loblolly pine). 0.0
• Blast2go: glucomannan 4-beta-mannosyltransferase 9-like 0.0
Internal
uagpf_v2_unigene27390 uagpf v2.0 517
• AutoFact: Cellulose synthase-like A1 n=2 Tax=Pinaceae RepID=A3QT94_PINTA 0.0
• FL-Next: tr=Cellulose synthase-like A1; Pinus taeda (Loblolly pine). 0.0
• Blast2go: glucomannan 4-beta-mannosyltransferase 9-like 0.0
N-terminus
uagpf_v2_unigene28241 uagpf v2.0 378
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
unknown
uagpf_v2_unigene28776 uagpf v2.0 228
• AutoFact: Histone deacetylase (Fragment) n=2 Tax=Malpighiales RepID=B9IEX4_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone deacetylase 0.0
Putative Complete
uagpf_v2_unigene31071 uagpf v2.0 262
• AutoFact: Global transcription factor group (Fragment) n=1 Tax=Populus trichocarpa RepID=B9I3M5_POPTR 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: global transcription factor group e4 4.45931e-17
Internal
uagpf_v2_unigene34033 uagpf v2.0 416
• AutoFact: Histone acetyltransferase HAC1 n=4 Tax=Arabidopsis RepID=HAC1_ARATH 4.0e-30
• FL-Next: sp=Histone acetyltransferase HAC1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: histone acetyltransferase 6.08289e-33
C-terminus
uagpf_v2_unigene35424 uagpf v2.0 242
• AutoFact: p300/CBP acetyltransferase-related protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TAD6_PHYPA 2.0e-28
• Blast2go: histone acetyltransferase 2.34058e-31
Coding
uagpf_v2_unigene35539 uagpf v2.0 244
• AutoFact: transcription initiation factor TFIID subunit 1-A [Arabidopsis thaliana] sp|Q8LRK9.1|TAF1A_ARATH RecName: Full=Transcription initiation factor TFIID subunit 1-A; Short=AtTAF1a; AltName: Full=TAFII250-A gb|AAM34782.1|AF510669_1 HAF1 [Arabidopsis thaliana] 3.0e-12
• Blast2go: transcription initiation factor subunit taf1 8.4424e-16
unknown
uagpf_v2_unigene36273 uagpf v2.0 415
• AutoFact: Histone deacetylase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TSU0_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone deacetylase 0.0
C-terminus
uagpf_v2_unigene36968 uagpf v2.0 376
• AutoFact: chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] dbj|BAF34944.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gb|EEE69802.1| hypothetical protein OsJ_29535 [Oryza sativa Japonica Group] 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
unknown
uagpf_v2_unigene36977 uagpf v2.0 376
• AutoFact: Cytosine-specific methyltransferase n=6 Tax=Nicotiana RepID=A0A9R7_TOBAC 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: DNA (cytosine-5)-methyltransferase 3.37713e-43
Putative Complete
uagpf_v2_unigene37289 uagpf v2.0 628
• AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SGL2_RICCO 0.0
• Blast2go: global transcription factor group e4 0.0
unknown
uagpf_v2_unigene37939 uagpf v2.0 232
• AutoFact: Cytosine-specific methyltransferase n=1 Tax=Daucus carota RepID=O48867_DAUCA 0.0
• FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna (cytosine-5)-methyltransferase 1b-like 0.0
Internal
uagpf_v2_unigene40042 uagpf v2.0 542
• AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MYK9_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
Internal
uagpf_v2_unigene40789 uagpf v2.0 331
• AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SGL2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: global transcription factor group e4 0.0
Putative C-terminus
uagpf_v2_unigene41283 uagpf v2.0 277
• AutoFact: Cellulose synthase-like A1 n=2 Tax=Pinaceae RepID=A3QT94_PINTA 0.0
• FL-Next: tr=Cellulose synthase-like A1; Pinus taeda (Loblolly pine). 0.0
• Blast2go: glucomannan 4-beta-mannosyltransferase 9-like 0.0
Internal
uagpf_v2_unigene42732 uagpf v2.0 281
• AutoFact: Histone deacetylase (Fragment) n=2 Tax=Malpighiales RepID=B9IEX4_POPTR 0.0
• FL-Next: sp=Histone deacetylase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: histone deacetylase 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain