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Assembly Name: uagpf v2.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene357 uagpf v2.0 368
AutoFact: Desaturase delta 9 n=2 Tax=Picea RepID=Q8S4Q3_PICGL 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene437 uagpf v2.0 1588
AutoFact: RuBisCO large subunit-binding protein subunit alpha, chloroplastic n=9 Tax=fabids RepID=RUBA_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ru large subunit-binding protein subunit chloroplastic-like 0.0
N-terminus
uagpf_v2_unigene1521 uagpf v2.0 485
AutoFact: Inorganic pyrophosphatase n=1 Tax=Cucumis melo subsp. melo RepID=E5GCQ8_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inorganic pyrophosphatase 0.0
C-terminus
uagpf_v2_unigene1728 uagpf v2.0 1475
AutoFact: 50S ribosomal protein L13, putative n=1 Tax=Ricinus communis RepID=B9T1K1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l13 0.0
Complete
uagpf_v2_unigene2219 uagpf v2.0 1006
AutoFact: Alternative oxidase n=1 Tax=Picea sitchensis RepID=A9NQ56_PICSI 0.0
FL-Next: sp=Alternative oxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: immutans protein 0.0
C-terminus
uagpf_v2_unigene4776 uagpf v2.0 622
AutoFact: RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF; AltName: Full=CpFrr; AltName: Full=RRFHCP; AltName: Full=Ribosome-releasing factor, chloroplastic; Flags: Precursor emb|CAB41419.1| chloroplast ribosome recycling factor protein [Spinacia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosome-recycling factor 0.0
C-terminus
uagpf_v2_unigene4830 uagpf v2.0 645
AutoFact: mRNA-binding protein precursor [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mrna binding protein precursor-like 0.0
C-terminus
uagpf_v2_unigene6021 uagpf v2.0 765
AutoFact: 50S ribosomal protein L27, chloroplastic n=1 Tax=Nicotiana tabacum RepID=RK27_TOBAC 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l27 0.0
C-terminus
uagpf_v2_unigene6103 uagpf v2.0 792
AutoFact: histone H4 [Hyacinthus orientalis] 4.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 0.0
Complete
uagpf_v2_unigene7517 uagpf v2.0 1017
AutoFact: Double Clp-N motif protein [Arabidopsis thaliana] gb|AAK59640.1| unknown protein [Arabidopsis thaliana] gb|AAL15176.1| unknown protein [Arabidopsis thaliana] gb|AAM63872.1| unknown [Arabidopsis thaliana] gb|ACG24236.1| ATP-dependent Clp protease ATP-bindi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: clp protease-related protein chloroplastic-like 0.0
Putative Complete
uagpf_v2_unigene7657 uagpf v2.0 587
AutoFact: Alternative oxidase n=1 Tax=Picea sitchensis RepID=A9NQ56_PICSI 0.0
FL-Next: sp=Alternative oxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: immutans protein 0.0
N-terminus
uagpf_v2_unigene8731 uagpf v2.0 537
AutoFact: 30S ribosomal protein S1, chloroplastic n=1 Tax=Spinacia oleracea RepID=RR1_SPIOL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein s1 0.0
N-terminus
uagpf_v2_unigene10355 uagpf v2.0 381
AutoFact: Inorganic pyrophosphatase n=1 Tax=Cucumis melo subsp. melo RepID=E5GCQ8_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inorganic pyrophosphatase 0.0
N-terminus
uagpf_v2_unigene10970 uagpf v2.0 429
AutoFact: 30S ribosomal protein S1, chloroplastic n=1 Tax=Spinacia oleracea RepID=RR1_SPIOL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein s1 0.0
Putative C-terminus
uagpf_v2_unigene11322 uagpf v2.0 355
AutoFact: histone H4 [Hyacinthus orientalis] 4.0e-38
Blast2go: histone h4 0.0
unknown
uagpf_v2_unigene11532 uagpf v2.0 473
AutoFact: RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF; AltName: Full=CpFrr; AltName: Full=RRFHCP; AltName: Full=Ribosome-releasing factor, chloroplastic; Flags: Precursor emb|CAB41419.1| chloroplast ribosome recycling factor protein [Spinacia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosome-recycling factor 0.0
Internal
uagpf_v2_unigene12013 uagpf v2.0 2009
AutoFact: Phosphoglycerate kinase n=2 Tax=Pinaceae RepID=A9NVA3_PICSI 0.0
FL-Next: sp=Phosphoglycerate kinase; Pinus pinaster (Maritime pine). 0.0
Blast2go: phosphoglycerate kinase 0.0
Complete
uagpf_v2_unigene12015 uagpf v2.0 2834
AutoFact: Chloroplast HSP70 n=4 Tax=rosids RepID=A2TJV6_CUCSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: stromal 70 kda heat shock-related chloroplastic-like 0.0
Complete
uagpf_v2_unigene12557 uagpf v2.0 1094
AutoFact: clathrin interactor EPSIN 1 [Arabidopsis thaliana] sp|Q8VY07.1|EPN1_ARATH RecName: Full=Clathrin interactor EPSIN 1; AltName: Full=EPSIN-related 1 gb|AAL67001.1| putative clathrin binding protein [Arabidopsis thaliana] gb|AAM20255.1| putative clathrin bin 0.0
FL-Next: sp=Clathrin interactor EPSIN 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene12998 uagpf v2.0 817
AutoFact: PREDICTED: similar to Late histone H2A.2.2 n=2 Tax=Hydra magnipapillata RepID=UPI0001924B8D 3.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain