Sustainpine_db
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Assembly Name: uagpf v2.0

Name: mismatched DNA binding

Term: GO:0030983  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1556 uagpf v2.0 525
AutoFact: DNA mismatch repair protein Msh3 [Arabidopsis thaliana] sp|O65607.2|MSH3_ARATH RecName: Full=DNA mismatch repair protein Msh3; Short=AtMsh3 emb|CAA07684.1| Msh3 protein [Arabidopsis thaliana] gb|AEE85075.1| DNA mismatch repair protein Msh3 [Arabidopsis th 0.0
Blast2go: dna mismatch repair protein 0.0
unknown
uagpf_v2_unigene5516 uagpf v2.0 577
AutoFact: DNA mismatch repair protein [Petunia x hybrida] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna mismatch repair protein msh6-1 0.0
Putative Complete
uagpf_v2_unigene7291 uagpf v2.0 672
AutoFact: DNA mismatch repair protein MSH2, putative n=1 Tax=Ricinus communis RepID=B9RE38_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein MSH2; Zea mays (Maize). 0.0
Blast2go: dna mismatch repair protein msh2 0.0
C-terminus
uagpf_v2_unigene10710 uagpf v2.0 617
AutoFact: DNA mismatch repair protein MSH2, putative n=1 Tax=Ricinus communis RepID=B9RE38_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein Msh2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh2 0.0
Internal
uagpf_v2_unigene13552 uagpf v2.0 481
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna mismatch repair protein 0.0
C-terminus
uagpf_v2_unigene31763 uagpf v2.0 469
AutoFact: DNA mismatch repair protein MSH2, putative n=1 Tax=Ricinus communis RepID=B9RE38_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein Msh2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh2 0.0
Internal
uagpf_v2_unigene34546 uagpf v2.0 222
AutoFact: DNA mismatch repair protein MSH2, putative n=1 Tax=Ricinus communis RepID=B9RE38_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein MSH2; Zea mays (Maize). 0.0
Blast2go: dna mismatch repair protein msh2 0.0
Internal
uagpf_v2_unigene37438 uagpf v2.0 489
AutoFact: DNA mismatch repair protein Msh3 [Arabidopsis thaliana] sp|O65607.2|MSH3_ARATH RecName: Full=DNA mismatch repair protein Msh3; Short=AtMsh3 emb|CAA07684.1| Msh3 protein [Arabidopsis thaliana] gb|AEE85075.1| DNA mismatch repair protein Msh3 [Arabidopsis th 0.0
FL-Next: sp=DNA mismatch repair protein Msh3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein 0.0
Internal
uagpf_v2_unigene43150 uagpf v2.0 198
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: muts2 isoform 2 2.41504e-09
C-terminus
uagpf_v2_unigene43767 uagpf v2.0 225
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: mismatch repair endonuclease pms2-like 2.10195e-44
Internal
uagpf_v2_unigene46029 uagpf v2.0 444
AutoFact: Unassigned protein
Blast2go: muts2 isoform 2 2.41504e-09
Coding
uagpf_v2_unigene46273 uagpf v2.0 370
AutoFact: DNA mismatch repair protein MSH2, putative n=1 Tax=Ricinus communis RepID=B9RE38_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein MSH2; Zea mays (Maize). 0.0
Blast2go: dna mismatch repair protein msh2 0.0
Internal
uagpf_v2_unigene47849 uagpf v2.0 431
AutoFact: DNA mismatch repair protein [Petunia x hybrida] 0.0
FL-Next: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh6-1 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain