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Assembly Name: uagpf v2.0

Name: production of lsiRNA involved in RNA interference

Term: GO:0010599  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene8581 uagpf v2.0 315
• AutoFact: Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease III, bacterial [Medicago truncatula] 0.0
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: endoribonuclease dicer homolog 1-like 0.0
Internal
uagpf_v2_unigene8859 uagpf v2.0 362
• AutoFact: Dicer-like 4 n=1 Tax=Physcomitrella patens RepID=B3SRQ1_9BRYO 6.0e-12
• FL-Next: sp=Dicer-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dsrna-specific nuclease dicer and related ribonuclease 6.85019e-14
Internal
uagpf_v2_unigene27125 uagpf v2.0 832
• AutoFact: Eukaryotic translation initiation factor 2c, putative n=1 Tax=Ricinus communis RepID=B9S921_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein argonaute 7-like 0.0
C-terminus
uagpf_v2_unigene27691 uagpf v2.0 376
• AutoFact: Endoribonuclease Dicer homolog 1 n=4 Tax=Poaceae RepID=DCL1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: endoribonuclease dicer homolog 1-like 0.0
N-terminus
uagpf_v2_unigene33475 uagpf v2.0 424
• AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=2 Tax=Physcomitrella patens RepID=A9RV91_PHYPA 0.0
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: endoribonuclease dicer 0.0
Internal
uagpf_v2_unigene33736 uagpf v2.0 246
• AutoFact: Endoribonuclease Dicer homolog 1 n=4 Tax=Poaceae RepID=DCL1_ORYSJ 0.0
• Blast2go: endoribonuclease dicer homolog 1-like 0.0
Coding
uagpf_v2_unigene37998 uagpf v2.0 292
• AutoFact: Eukaryotic translation initiation factor 2c, putative n=1 Tax=Ricinus communis RepID=B9S921_RICCO 0.0
• Blast2go: protein argonaute 7-like 0.0
unknown
uagpf_v2_unigene41223 uagpf v2.0 321
• AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9GRS6_POPTR 0.0
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: endoribonuclease dicer 0.0
Internal
uagpf_v2_unigene46142 uagpf v2.0 296
• AutoFact: Eukaryotic translation initiation factor 2c, putative n=1 Tax=Ricinus communis RepID=B9S921_RICCO 0.0
• FL-Next: sp=Protein argonaute 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein argonaute 7-like 0.0
Internal
uagpf_v2_unigene47318 uagpf v2.0 172
• AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9GRS6_POPTR 0.0
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: endoribonuclease dicer 0.0
Internal
uagpf_v2_unigene47989 uagpf v2.0 307
• AutoFact: CAF protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: endoribonuclease dicer 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain