Name:
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Term:
GO:0000184
Source:
GO from Blast2go
Ontology:
Biological Process
UniGenes with this annotation:
|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
uagpf_v2_unigene11759
|
uagpf v2.0
|
417
|
|
• AutoFact: HIV Tat-specific factor 1 [Arabidopsis thaliana] emb|CAC01867.1| putative protein [Arabidopsis thaliana] gb|AAY25436.1| At5g16260 [Arabidopsis thaliana] dbj|BAF01062.1| hypothetical protein [Arabidopsis thaliana] gb|AED92266.1| HIV Tat-specific factor 1 [
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: hiv tat-specific factor 1 homolog
|
0.0
|
|
N-terminus
|
|
uagpf_v2_unigene31210
|
uagpf v2.0
|
472
|
|
• AutoFact: EST1 domain containing protein
|
8.0e-24
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: telomerase activating protein est1
|
0.0
|
|
Internal
|
|
uagpf_v2_unigene38002
|
uagpf v2.0
|
410
|
|
• AutoFact: EST1 domain containing protein
|
8.0e-24
|
|
• Blast2go: telomerase activating protein est1
|
0.0
|
|
unknown
|
|
uagpf_v2_unigene43386
|
uagpf v2.0
|
332
|
|
• AutoFact: Nonsense-mediated decay UPF3 [Medicago truncatula]
|
0.0
|
|
• FL-Next: tr=Smg-4/UPF3-like protein; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: smg-4 upf3-like protein
|
0.0
|
|
N-terminus
|
|
uagpf_v2_unigene45147
|
uagpf v2.0
|
456
|
|
• AutoFact: Nonsense-mediated decay UPF3 [Medicago truncatula]
|
0.0
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
• Blast2go: smg-4 upf3-like protein
|
0.0
|
|
Internal
|
Go to Annotations List
