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Assembly Name: uagpf v2.0

Name: DNA-directed RNA polymerase II, core complex

Term: GO:0005665  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene19630 uagpf v2.0 571
AutoFact: DNA-directed RNA polymerase II subunit E [Arabidopsis thaliana] gb|AAK48978.1|AF370551_1 RNA polymerase I, II and III 24.3 kDa subunit [Arabidopsis thaliana] gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5 [Arabidopsis thaliana] gb|AAC28253.1| RNA polymerase I 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase ii and iii kda subunit 6.99325e-36
Putative Complete
uagpf_v2_unigene19771 uagpf v2.0 916
AutoFact: DNA-directed RNA polymerase, 14 to 18 kDa subunit [Medicago truncatula] 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase rpb6 0.0
C-terminus
uagpf_v2_unigene30937 uagpf v2.0 310
AutoFact: DNA-directed RNA polymerase n=6 Tax=core eudicotyledons RepID=B9SXC0_RICCO 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase ii subunit rpb1-like 0.0
N-terminus
uagpf_v2_unigene51027 uagpf v2.0 964
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Vitis vinifera (Grape). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 0.0
Complete
uagpf_v2_unigene51456 uagpf v2.0 474
AutoFact: DNA-directed RNA Polymerase II subunit K [Arabidopsis thaliana] dbj|BAB09703.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76628.1| unknown protein [Arabidopsis thaliana] gb|AAL85038.1| unknown protein [Arabidopsis thaliana] gb|AAM67289.1| DNA d 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 3.19131e-32
Complete
uagpf_v2_unigene51678 uagpf v2.0 635
AutoFact: DNA-directed RNA Polymerase II subunit K [Arabidopsis thaliana] dbj|BAB09703.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76628.1| unknown protein [Arabidopsis thaliana] gb|AAL85038.1| unknown protein [Arabidopsis thaliana] gb|AAM67289.1| DNA d 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 5.44155e-31
Complete
uagpf_v2_unigene51944 uagpf v2.0 465
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 0.0
FL-Next: tr=15.9 kDa subunit of RNA polymerase II; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: kda subunit of rna polymerase ii 0.0
C-terminus
uagpf_v2_unigene52015 uagpf v2.0 493
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Vitis vinifera (Grape). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 0.0
Putative Complete
uagpf_v2_unigene52748 uagpf v2.0 449
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 0.0
unknown
uagpf_v2_unigene52882 uagpf v2.0 610
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 0.0
C-terminus
uagpf_v2_unigene52976 uagpf v2.0 246
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 0.0
Blast2go: kda subunit of rna polymerase ii 0.0
unknown
uagpf_v2_unigene53388 uagpf v2.0 441
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Vitis vinifera (Grape). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 0.0
N-terminus
uagpf_v2_unigene53547 uagpf v2.0 383
AutoFact: DNA-directed RNA Polymerase II subunit K [Arabidopsis thaliana] dbj|BAB09703.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76628.1| unknown protein [Arabidopsis thaliana] gb|AAL85038.1| unknown protein [Arabidopsis thaliana] gb|AAM67289.1| DNA d 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii subunit rpabc4-like 5.75478e-28
Complete
uagpf_v2_unigene53673 uagpf v2.0 414
AutoFact: DNA-directed RNA polymerase II, subunit n, putative n=2 Tax=Tracheophyta RepID=B9T3C0_RICCO 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase ii subunit l 7.30978e-15
Putative Complete
uagpf_v2_unigene54864 uagpf v2.0 296
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dna-directed rna polymerase ii subunit rpb4 0.0
C-terminus
uagpf_v2_unigene55261 uagpf v2.0 505
AutoFact: DNA-directed RNA polymerase, 14 to 18 kDa subunit [Medicago truncatula] 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase rpb6 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain