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Assembly Name: uagpf v2.0

Name: nuclear pore

Term: GO:0005643  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene849 uagpf v2.0 902
AutoFact: Ran-binding protein, putative n=1 Tax=Ricinus communis RepID=B9SQB9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ran-binding protein 1 domain-containing protein 0.0
N-terminus
uagpf_v2_unigene878 uagpf v2.0 683
AutoFact: Importin-alpha re-exporter, putative n=1 Tax=Ricinus communis RepID=B9SBF8_RICCO 0.0
FL-Next: sp=Exportin-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene1657 uagpf v2.0 432
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: armadillo beta-catenin-like repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene2237 uagpf v2.0 666
AutoFact: Importin-7, putative n=3 Tax=rosids RepID=B9SP38_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: probable importin-7 homolog 0.0
Internal
uagpf_v2_unigene4347 uagpf v2.0 1285
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene6332 uagpf v2.0 1109
AutoFact: Importin-alpha re-exporter, putative n=1 Tax=Ricinus communis RepID=B9SBF8_RICCO 0.0
FL-Next: sp=Exportin-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene7958 uagpf v2.0 627
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gb|AAL32805.1| putative protein [Arabidopsis thaliana] gb|AAR23706.1| At4g27640 [Arabidopsis thaliana] gb|AEE85373.1| armadillo/beta-catenin-like repeat-containing protein [Arabi 0.0
Blast2go: probable importin subunit beta-4-like 0.0
unknown
uagpf_v2_unigene8552 uagpf v2.0 428
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] dbj|BAB09724.1| importin beta [Arabidopsis thaliana] gb|AED96362.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: importin subunit beta-1-like 0.0
Internal
uagpf_v2_unigene8959 uagpf v2.0 790
AutoFact: nuclear pore complex protein-like protein [Arabidopsis thaliana] dbj|BAB09662.1| unnamed protein product [Arabidopsis thaliana] gb|AED90908.1| nuclear pore complex protein-like protein [Arabidopsis thaliana] 0.0
Blast2go: nuclear pore complex protein 0.0
Coding
uagpf_v2_unigene9539 uagpf v2.0 372
AutoFact: nuclear pore complex protein-like protein [Arabidopsis thaliana] dbj|BAB09662.1| unnamed protein product [Arabidopsis thaliana] gb|AED90908.1| nuclear pore complex protein-like protein [Arabidopsis thaliana] 7.0e-11
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: nuclear pore complex protein 8.74603e-14
Putative N-terminus
uagpf_v2_unigene9569 uagpf v2.0 902
AutoFact: Importin-7, putative n=3 Tax=rosids RepID=B9SP38_RICCO 0.0
FL-Next: sp=Exportin-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable importin-7 homolog 0.0
N-terminus
uagpf_v2_unigene10214 uagpf v2.0 672
AutoFact: Nucleoporin interacting component; Protein prenyltransferase [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein at2g41620-like 0.0
Putative C-terminus
uagpf_v2_unigene10750 uagpf v2.0 592
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: armadillo beta-catenin-like repeat-containing protein 0.0
Internal
uagpf_v2_unigene13185 uagpf v2.0 524
AutoFact: PREDICTED: similar to protein transporter n=1 Tax=Vitis vinifera RepID=UPI000198299D 0.0
Blast2go: importin 9 0.0
unknown
uagpf_v2_unigene15234 uagpf v2.0 616
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_77.assembly12x (Fragment) n=3 Tax=core eudicotyledons RepID=D7SY66_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene16725 uagpf v2.0 725
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_77.assembly12x (Fragment) n=3 Tax=core eudicotyledons RepID=D7SY66_VITVI 0.0
FL-Next: sp=Importin subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene17475 uagpf v2.0 633
AutoFact: nucleoporin 50 protein [Arabidopsis thaliana] gb|AAG51549.1|AC037424_14 unknown protein; 23094-21772 [Arabidopsis thaliana] gb|AAK59765.1| At1g52380/F19K6_4 [Arabidopsis thaliana] gb|AAL15374.1| At1g52380/F19K6_4 [Arabidopsis thaliana] gb|AEE32797.1| nucl 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ran-binding protein 1 domain-containing protein 0.0
C-terminus
uagpf_v2_unigene17657 uagpf v2.0 1098
AutoFact: Ran-binding protein, putative n=1 Tax=Ricinus communis RepID=B9SQB9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ran-binding protein 1 domain-containing protein 0.0
C-terminus
uagpf_v2_unigene18855 uagpf v2.0 1930
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_77.assembly12x (Fragment) n=3 Tax=core eudicotyledons RepID=D7SY66_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
uagpf_v2_unigene19594 uagpf v2.0 433
AutoFact: nucleoporin 50 protein [Arabidopsis thaliana] gb|AAG51549.1|AC037424_14 unknown protein; 23094-21772 [Arabidopsis thaliana] gb|AAK59765.1| At1g52380/F19K6_4 [Arabidopsis thaliana] gb|AAL15374.1| At1g52380/F19K6_4 [Arabidopsis thaliana] gb|AEE32797.1| nucl 7.0e-36
Blast2go: ran-binding protein 1 domain-containing protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain