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Assembly Name: uagpf v2.0

Name: nuclear pore

Term: GO:0005643  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene27415 uagpf v2.0 460
AutoFact: RecName: Full=Importin subunit alpha; AltName: Full=Karyopherin subunit alpha; Short=KAP alpha gb|AAC23722.1| importin alpha [Solanum lycopersicum] 0.0
FL-Next: sp=Importin subunit alpha; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene30049 uagpf v2.0 344
AutoFact: nucleoporin 50 protein [Arabidopsis thaliana] gb|AAG51549.1|AC037424_14 unknown protein; 23094-21772 [Arabidopsis thaliana] gb|AAK59765.1| At1g52380/F19K6_4 [Arabidopsis thaliana] gb|AAL15374.1| At1g52380/F19K6_4 [Arabidopsis thaliana] gb|AEE32797.1| nucl 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ran-binding protein 1 domain-containing protein 0.0
Putative N-terminus
uagpf_v2_unigene31565 uagpf v2.0 650
AutoFact: Nucleoporin interacting component; Protein prenyltransferase [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein at2g41620-like 0.0
C-terminus
uagpf_v2_unigene33942 uagpf v2.0 362
AutoFact: Importin-7, putative n=3 Tax=rosids RepID=B9SP38_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: probable importin-7 homolog 0.0
Internal
uagpf_v2_unigene34670 uagpf v2.0 181
AutoFact: Importin-7, putative n=3 Tax=rosids RepID=B9SP38_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: probable importin-7 homolog 0.0
Internal
uagpf_v2_unigene36427 uagpf v2.0 479
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_77.assembly12x (Fragment) n=3 Tax=core eudicotyledons RepID=D7SY66_VITVI 0.0
FL-Next: sp=Importin subunit alpha-1a; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene37751 uagpf v2.0 452
AutoFact: RecName: Full=Importin subunit alpha; AltName: Full=Karyopherin subunit alpha; Short=KAP alpha gb|AAC23722.1| importin alpha [Solanum lycopersicum] 0.0
FL-Next: sp=Importin subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene38734 uagpf v2.0 420
AutoFact: Importin-alpha re-exporter, putative n=1 Tax=Ricinus communis RepID=B9SBF8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
uagpf_v2_unigene42544 uagpf v2.0 212
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gb|AAL32805.1| putative protein [Arabidopsis thaliana] gb|AAR23706.1| At4g27640 [Arabidopsis thaliana] gb|AEE85373.1| armadillo/beta-catenin-like repeat-containing protein [Arabi 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: probable importin subunit beta-4-like 0.0
Internal
uagpf_v2_unigene43200 uagpf v2.0 360
AutoFact: Nucleoporin interacting component; Protein prenyltransferase [Medicago truncatula] 0.0
FL-Next: sp=Uncharacterized protein At2g41620; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein at2g41620-like 0.0
Internal
uagpf_v2_unigene43831 uagpf v2.0 290
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gb|AAL32805.1| putative protein [Arabidopsis thaliana] gb|AAR23706.1| At4g27640 [Arabidopsis thaliana] gb|AEE85373.1| armadillo/beta-catenin-like repeat-containing protein [Arabi 0.0
FL-Next: tr=HEAT repeat family protein, expressed; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: probable importin subunit beta-4-like 0.0
Internal
uagpf_v2_unigene44329 uagpf v2.0 259
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] dbj|BAB09724.1| importin beta [Arabidopsis thaliana] gb|AED96362.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: importin subunit beta-1-like 0.0
N-terminus
uagpf_v2_unigene44897 uagpf v2.0 216
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_77.assembly12x (Fragment) n=3 Tax=core eudicotyledons RepID=D7SY66_VITVI 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene47288 uagpf v2.0 380
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene48258 uagpf v2.0 278
AutoFact: Importin-7, putative n=3 Tax=rosids RepID=B9SP38_RICCO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: probable importin-7 homolog 0.0
Internal
uagpf_v2_unigene48591 uagpf v2.0 364
AutoFact: PREDICTED: similar to protein transporter n=1 Tax=Vitis vinifera RepID=UPI000198299D 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: importin 9 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain