Sustainpine_db
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Assembly Name: uagpf v2.0

Name: cytosolic small ribosomal subunit

Term: GO:0022627  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene134 uagpf v2.0 851
• AutoFact: 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_190089.2| 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_001078781.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana] sp|P49200.2|RS201_ARATH RecName: Full=40S ribosomal protein S20-1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s20 0.0
Complete
uagpf_v2_unigene382 uagpf v2.0 911
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 2.0e-38
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
uagpf_v2_unigene725 uagpf v2.0 491
• AutoFact: Ribosomal protein S27 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SLV7_PHYPA 2.0e-33
• FL-Next: sp=Ribosomal protein S27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal protein s27 1.4013e-44
Complete
uagpf_v2_unigene1322 uagpf v2.0 1086
• AutoFact: 40S ribosomal protein S5-1 [Arabidopsis thaliana] ref|NP_001031502.1| 40S ribosomal protein S5-1 [Arabidopsis thaliana] sp|Q9ZUT9.1|RS51_ARATH RecName: Full=40S ribosomal protein S5-1 gb|AAC98068.1| 40S ribosomal protein S5 [Arabidopsis thaliana] gb|AAL24 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s5 0.0
Complete
uagpf_v2_unigene1755 uagpf v2.0 1040
• AutoFact: small subunit ribosomal protein S17 [Arabidopsis thaliana] gb|AAD43160.1|AC007504_15 Putative ribosomal protein [Arabidopsis thaliana] dbj|BAC42717.1| unknown protein [Arabidopsis thaliana] gb|AAO50680.1| putative 40S ribosomal protein S17 [Arabidopsis th 1.0e-33
• FL-Next: sp=30S ribosomal protein S17, chloroplastic; Thalassiosira pseudonana (Marine diatom) (Cyclotella nana). Plastid; Chloroplast. 0.0
• Blast2go: 30s ribosomal protein s17 2.8026e-45
Complete
uagpf_v2_unigene5201 uagpf v2.0 640
• AutoFact: 40S ribosomal protein S19-1 [Arabidopsis thaliana] sp|Q9SGA6.1|RS191_ARATH RecName: Full=40S ribosomal protein S19-1 gb|AAF14828.1|AC011664_10 putative 40S ribosomal protein S19 [Arabidopsis thaliana] gb|AAK44092.1|AF370277_1 putative 40S ribosomal protei 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s19 0.0
Complete
uagpf_v2_unigene6206 uagpf v2.0 603
• AutoFact: Ribosomal protein S27 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SLV7_PHYPA 2.0e-33
• FL-Next: sp=Ribosomal protein S27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal protein s27 1.4013e-44
C-terminus
uagpf_v2_unigene11078 uagpf v2.0 1103
• AutoFact: 40S ribosomal protein S15a-5 [Arabidopsis thaliana] ref|XP_002869431.1| RPS15AE [Arabidopsis lyrata subsp. lyrata] sp|Q9M0E0.1|R15A5_ARATH RecName: Full=40S ribosomal protein S15a-5 emb|CAB79701.1| ribosomal protein S15a homolog [Arabidopsis thaliana] gb| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s15a-5 0.0
Complete
uagpf_v2_unigene11663 uagpf v2.0 907
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 1.0e-38
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
uagpf_v2_unigene11815 uagpf v2.0 501
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 1.0e-38
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene12104 uagpf v2.0 629
• AutoFact: 40S ribosomal protein S20-1 n=12 Tax=rosids RepID=RS201_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s20 0.0
Complete
uagpf_v2_unigene14052 uagpf v2.0 753
• AutoFact: 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_200478.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_565458.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|XP_002866160.1| 40S ribosomal protein S30 [Arabidopsis lyrata subsp. l 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s30 1.23442e-26
Complete
uagpf_v2_unigene14074 uagpf v2.0 1099
• AutoFact: 40S ribosomal protein S6 n=7 Tax=Spermatophyta RepID=RS6_ASPOF 0.0
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
uagpf_v2_unigene14082 uagpf v2.0 662
• AutoFact: 40S ribosomal protein S19-1 [Arabidopsis thaliana] sp|Q9SGA6.1|RS191_ARATH RecName: Full=40S ribosomal protein S19-1 gb|AAF14828.1|AC011664_10 putative 40S ribosomal protein S19 [Arabidopsis thaliana] gb|AAK44092.1|AF370277_1 putative 40S ribosomal protei 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s19 0.0
Complete
uagpf_v2_unigene15443 uagpf v2.0 646
• AutoFact: 40S ribosomal protein S29 n=4 Tax=Magnoliophyta RepID=RS29_ARATH 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s29 5.37615e-37
Complete
uagpf_v2_unigene15448 uagpf v2.0 689
• AutoFact: 40S ribosomal protein S19-1 [Arabidopsis thaliana] sp|Q9SGA6.1|RS191_ARATH RecName: Full=40S ribosomal protein S19-1 gb|AAF14828.1|AC011664_10 putative 40S ribosomal protein S19 [Arabidopsis thaliana] gb|AAK44092.1|AF370277_1 putative 40S ribosomal protei 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s19 0.0
C-terminus
uagpf_v2_unigene16448 uagpf v2.0 718
• AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pointed first leaf 0.0
Complete
uagpf_v2_unigene17275 uagpf v2.0 882
• AutoFact: 40S ribosomal protein S13-1 n=22 Tax=core eudicotyledons RepID=RS131_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s13 0.0
Complete
uagpf_v2_unigene17488 uagpf v2.0 537
• AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pointed first leaf 0.0
N-terminus
uagpf_v2_unigene17857 uagpf v2.0 653
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 2.0e-38
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain