Sustainpine_db
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Assembly Name: uagpf v2.0

Name: posttranscriptional gene silencing by RNA

Term: GO:0035194  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene622 uagpf v2.0 1106
• AutoFact: Hydroxyproline-rich glycoprotein-like protein n=3 Tax=Arabidopsis RepID=Q8VYM7_ARATH 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hydroxyproline-rich glyco protein 0.0
N-terminus
uagpf_v2_unigene2768 uagpf v2.0 879
• AutoFact: cleavage and polyadenylation specificity factor subunit 2 [Arabidopsis thaliana] sp|Q9LKF9.2|CPSF2_ARATH RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit 0.0
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 2; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: cleavage and polyadenylation specificity factor 0.0
C-terminus
uagpf_v2_unigene3584 uagpf v2.0 664
• AutoFact: cleavage and polyadenylation specificity factor subunit 2 [Arabidopsis thaliana] sp|Q9LKF9.2|CPSF2_ARATH RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit 0.0
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: cleavage and polyadenylation specificity factor 0.0
N-terminus
uagpf_v2_unigene6023 uagpf v2.0 962
• AutoFact: cleavage and polyadenylation specificity factor subunit 2 [Arabidopsis thaliana] sp|Q9LKF9.2|CPSF2_ARATH RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit 0.0
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 2; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: cleavage and polyadenylation specificity factor 0.0
Internal
uagpf_v2_unigene11425 uagpf v2.0 480
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [Arabidopsis thaliana] gb|AAL67014.1| putative RNA helicase [Arabidopsis thaliana] gb|AAM91806.1| putative RNA helicase [Arabidopsis thaliana] gb|AEE31492.1| pre-mRNA-splicing factor ATP-dependent 3.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pre-mrna-splicing factor atp-dependent rna helicase dhx16 0.0
Putative C-terminus
uagpf_v2_unigene12034 uagpf v2.0 517
• AutoFact: Hydroxyproline-rich glycoprotein-like protein n=3 Tax=Arabidopsis RepID=Q8VYM7_ARATH 2.0e-16
• Blast2go: hydroxyproline-rich glyco protein 0.0
unknown
uagpf_v2_unigene16935 uagpf v2.0 879
• AutoFact: Hydroxyproline-rich glycoprotein-like protein n=3 Tax=Arabidopsis RepID=Q8VYM7_ARATH 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hydroxyproline-rich glyco protein 0.0
C-terminus
uagpf_v2_unigene29384 uagpf v2.0 257
• AutoFact: Hydroxyproline-rich glycoprotein-like protein n=3 Tax=Arabidopsis RepID=Q8VYM7_ARATH 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hydroxyproline-rich glyco protein 0.0
Internal
uagpf_v2_unigene38923 uagpf v2.0 389
• AutoFact: Hydroxyproline-rich glycoprotein-like protein n=3 Tax=Arabidopsis RepID=Q8VYM7_ARATH 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: proline-rich protein 4.82143e-21
Internal
uagpf_v2_unigene44587 uagpf v2.0 334
• AutoFact: symplekin [Arabidopsis thaliana] emb|CAB81923.1| putative protein [Arabidopsis thaliana] gb|AED90339.1| symplekin [Arabidopsis thaliana] 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: unnamed protein product [Vitis vinifera] 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain