Sustainpine_db
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Assembly Name: uagpf v2.0

Name: regulation of circadian rhythm

Term: GO:0042752  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene1378 uagpf v2.0 459
• AutoFact: Protein SENSITIVITY TO RED LIGHT REDUCED, putative n=1 Tax=Ricinus communis RepID=B9S4K4_RICCO 0.0
• FL-Next: sp=Protein SENSITIVITY TO RED LIGHT REDUCED 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: sensitivity to red light reduced protein 0.0
C-terminus
uagpf_v2_unigene2067 uagpf v2.0 634
• AutoFact: Two-component response regulator ARR3 n=3 Tax=Arabidopsis RepID=ARR3_ARATH 3.0e-22
• FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
• Blast2go: two-component sensor protein histidine protein 7.69687e-27
N-terminus
uagpf_v2_unigene4252 uagpf v2.0 296
• AutoFact: Protein FAM50A, putative n=2 Tax=fabids RepID=B9STC7_RICCO 7.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein xap5 circadian timekeeper 3.92848e-35
N-terminus
uagpf_v2_unigene5401 uagpf v2.0 809
• AutoFact: Protein FAM50A, putative n=2 Tax=fabids RepID=B9STC7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene5844 uagpf v2.0 1329
• AutoFact: Type A response regulator RR1 n=1 Tax=Phaseolus vulgaris RepID=B0YGG5_PHAVU 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: type a response regulator 0.0
Complete
uagpf_v2_unigene10469 uagpf v2.0 406
• AutoFact: transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] gb|AAM10317.1| AT3g20810/MOE17_10 [Arabidopsis thaliana] gb|AAM78048.1| AT3g20810/MOE17_10 [Arabidopsis thaliana] gb|AEE76425.1| transcription factor jumonji (jmjC) domai 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: transcription factor jumonji domain-containing protein 0.0
Internal
uagpf_v2_unigene11044 uagpf v2.0 567
• AutoFact: Response regulator 1 n=1 Tax=Pinus pinea RepID=C0LLL0_PINPI 3.0e-30
• FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
• Blast2go: type-a response regulator 1.2697e-38
Putative N-terminus
uagpf_v2_unigene25268 uagpf v2.0 387
• AutoFact: Protein FAM50A, putative n=2 Tax=fabids RepID=B9STC7_RICCO 7.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein xap5 circadian timekeeper 3.92848e-35
N-terminus
uagpf_v2_unigene27957 uagpf v2.0 738
• AutoFact: Protein SENSITIVITY TO RED LIGHT REDUCED, putative n=1 Tax=Ricinus communis RepID=B9S4K4_RICCO 0.0
• Blast2go: sensitivity to red light reduced protein 0.0
unknown
uagpf_v2_unigene34154 uagpf v2.0 278
• AutoFact: Auxin-resistance protein 6 (Fragment) n=2 Tax=Arabidopsis thaliana RepID=A5YXU7_ARATH 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: auxin-resistance protein 6 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain