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Assembly Name: uagpf v2.0

Name: ribosome biogenesis

Term: GO:0042254  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene242 uagpf v2.0 482
AutoFact: RecName: Full=60S ribosomal protein L35 gb|AAF34800.1|AF227980_1 60S ribosomal protein L35 [Euphorbia esula] 1.00053e-42
Blast2go: 60s ribosomal protein l35 0.0
unknown
uagpf_v2_unigene725 uagpf v2.0 491
AutoFact: Ribosomal protein S27 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SLV7_PHYPA 2.0e-33
FL-Next: sp=Ribosomal protein S27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein s27 1.4013e-44
Complete
uagpf_v2_unigene1037 uagpf v2.0 547
AutoFact: Shwachman-Bodian-Diamond syndrome protein, putative n=1 Tax=Ricinus communis RepID=B9S2M8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene1075 uagpf v2.0 548
AutoFact: Ribosomal protein L7Ae-like [Arabidopsis thaliana] 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene1261 uagpf v2.0 327
AutoFact: 30S ribosomal protein S6 alpha [Arabidopsis thaliana] sp|Q8VY91.1|RR6_ARATH RecName: Full=30S ribosomal protein S6 alpha, chloroplastic; Flags: Precursor gb|AAL61951.1| plastid ribosomal protein S6, putative [Arabidopsis thaliana] gb|AAM47900.1| plastid r 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene1495 uagpf v2.0 685
AutoFact: similar to 60S ribosomal protein L35 [Solanum lycopersicum] 8.99634e-43
Blast2go: 60s ribosomal protein l35 0.0
unknown
uagpf_v2_unigene1518 uagpf v2.0 474
AutoFact: ribosomal protein L18e/L15 [Arabidopsis thaliana] dbj|BAB11434.1| unnamed protein product [Arabidopsis thaliana] gb|AAL91235.1| unknown protein [Arabidopsis thaliana] gb|AAM62464.1| unknown [Arabidopsis thaliana] gb|AAM91243.1| unknown protein [Arabidopsi 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene2105 uagpf v2.0 663
AutoFact: 50S ribosomal protein L18, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RCM8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l18 0.0
Complete
uagpf_v2_unigene3193 uagpf v2.0 987
AutoFact: Mo25 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene3541 uagpf v2.0 429
AutoFact: putativeGTP-binding protein 2 [Arabidopsis thaliana] gb|AAG52287.1|AC019018_24 putative GTP-binding protein; 106556-109264 [Arabidopsis thaliana] gb|AEE32873.1| putativeGTP-binding protein 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleolar gtp-binding protein 2-like 0.0
N-terminus
uagpf_v2_unigene4921 uagpf v2.0 1202
AutoFact: Ribosomal protein L9/RNase H1 [Arabidopsis thaliana] dbj|BAA97147.1| unnamed protein product [Arabidopsis thaliana] gb|AAO22701.1| unknown protein [Arabidopsis thaliana] gb|AAO42390.1| unknown protein [Arabidopsis thaliana] gb|AED96300.1| Ribosomal protei 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l9 0.0
Complete
uagpf_v2_unigene5802 uagpf v2.0 896
AutoFact: 50S ribosomal protein L9, chloroplastic n=1 Tax=Pisum sativum RepID=RK9_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l9 0.0
Complete
uagpf_v2_unigene6206 uagpf v2.0 603
AutoFact: Ribosomal protein S27 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SLV7_PHYPA 2.0e-33
FL-Next: sp=Ribosomal protein S27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein s27 1.4013e-44
C-terminus
uagpf_v2_unigene6357 uagpf v2.0 799
AutoFact: similar to 60S ribosomal protein L35 [Solanum lycopersicum] 8.99634e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l35 0.0
Putative Complete
uagpf_v2_unigene8825 uagpf v2.0 352
AutoFact: putativeGTP-binding protein 2 [Arabidopsis thaliana] gb|AAG52287.1|AC019018_24 putative GTP-binding protein; 106556-109264 [Arabidopsis thaliana] gb|AEE32873.1| putativeGTP-binding protein 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleolar gtp-binding protein 2-like 0.0
Internal
uagpf_v2_unigene10094 uagpf v2.0 309
AutoFact: Shwachman-Bodian-Diamond syndrome protein, putative n=1 Tax=Ricinus communis RepID=B9S2M8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene10180 uagpf v2.0 648
AutoFact: replication factor C subunit 3 [Arabidopsis thaliana] gb|AAG51681.1|AC010704_25 putative replication factor C; 24844-22715 [Arabidopsis thaliana] gb|AAL38893.1| putative replication factor C [Arabidopsis thaliana] gb|AAM51357.1| putative replication facto 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor c subunit 5-like 0.0
Putative C-terminus
uagpf_v2_unigene10579 uagpf v2.0 568
AutoFact: 50S ribosomal protein L10, putative n=1 Tax=Ricinus communis RepID=B9RY97_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene10794 uagpf v2.0 453
AutoFact: 50S ribosomal protein L19-1 [Arabidopsis thaliana] sp|Q8W463.1|RK191_ARATH RecName: Full=50S ribosomal protein L19-1, chloroplastic; Flags: Precursor gb|AAL32899.1| Unknown protein [Arabidopsis thaliana] gb|AAM10187.1| unknown protein [Arabidopsis thalian 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l19 0.0
C-terminus
uagpf_v2_unigene11287 uagpf v2.0 662
AutoFact: DUF663 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: pre-rrna-processing protein tsr1 homolog 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain