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Assembly Name: uagpf v2.0

Name: chloroplast organization

Term: GO:0009658  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene437 uagpf v2.0 1588
AutoFact: RuBisCO large subunit-binding protein subunit alpha, chloroplastic n=9 Tax=fabids RepID=RUBA_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ru large subunit-binding protein subunit chloroplastic-like 0.0
N-terminus
uagpf_v2_unigene977 uagpf v2.0 1460
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NTR6_PICSI 0.0
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent clp protease proteolytic subunit 0.0
Putative Complete
uagpf_v2_unigene1114 uagpf v2.0 527
AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9SJA7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene1446 uagpf v2.0 1022
AutoFact: Ribonucleoside-diphosphate reductase n=1 Tax=Musa acuminata RepID=Q6RZW3_MUSAC 0.0
FL-Next: sp=Ribonucleoside-diphosphate reductase large subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribonucleoside-diphosphate reductase large subunit 0.0
C-terminus
uagpf_v2_unigene1661 uagpf v2.0 667
AutoFact: Translation elongation factor G, putative n=1 Tax=Ricinus communis RepID=B9RBP7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene1978 uagpf v2.0 579
AutoFact: NifU-like protein 2 [Arabidopsis thaliana] sp|Q93W20.1|NIFU2_ARATH RecName: Full=NifU-like protein 2, chloroplastic; Short=AtCNfu2; Short=AtCnfU-V; Flags: Precursor gb|AAK44168.1|AF370353_1 unknown protein [Arabidopsis thaliana] gb|AAL16167.1|AF428399_1 A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nitrogen fixation protein 0.0
C-terminus
uagpf_v2_unigene2403 uagpf v2.0 505
AutoFact: Iron-sulfur cluster assembly protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IR30_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at4g01940 t7b11_20 0.0
N-terminus
uagpf_v2_unigene3438 uagpf v2.0 620
AutoFact: putative riboflavin biosynthesis protein ribD [Oryza sativa Japonica Group] dbj|BAD21976.1| putative riboflavin biosynthesis protein ribD [Oryza sativa Japonica Group] 0.0
FL-Next: tr=cDNA clone:J013024H13, full insert sequence; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene3670 uagpf v2.0 600
AutoFact: Peptidase M50 family protein [Arabidopsis thaliana] gb|AAK92744.1| unknown protein [Arabidopsis thaliana] gb|AAN71977.1| unknown protein [Arabidopsis thaliana] gb|AED93947.1| Peptidase M50 family protein [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene4106 uagpf v2.0 624
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NTE8_PICSI 0.0
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent clp protease proteolytic subunit 0.0
N-terminus
uagpf_v2_unigene4370 uagpf v2.0 596
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SEX4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: light-regulated zinc finger protein 1 0.0
C-terminus
uagpf_v2_unigene4776 uagpf v2.0 622
AutoFact: RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF; AltName: Full=CpFrr; AltName: Full=RRFHCP; AltName: Full=Ribosome-releasing factor, chloroplastic; Flags: Precursor emb|CAB41419.1| chloroplast ribosome recycling factor protein [Spinacia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosome-recycling factor 0.0
C-terminus
uagpf_v2_unigene5353 uagpf v2.0 421
AutoFact: Ribonucleoside-diphosphate reductase n=1 Tax=Musa acuminata RepID=Q6RZW3_MUSAC 0.0
Blast2go: ribonucleoside-diphosphate reductase large subunit 0.0
unknown
uagpf_v2_unigene5590 uagpf v2.0 778
AutoFact: Mitochondrial carrier protein, putative n=1 Tax=Ricinus communis RepID=B9SW87_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial carrier 0.0
C-terminus
uagpf_v2_unigene6789 uagpf v2.0 528
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=D5A7Z0_PICSI 0.0
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent clp protease proteolytic subunit 0.0
N-terminus
uagpf_v2_unigene6864 uagpf v2.0 546
AutoFact: Glutamyl-tRNA synthetase 1, 2, putative n=1 Tax=Ricinus communis RepID=B9T2L7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamyl-trna synthetase 0.0
C-terminus
uagpf_v2_unigene7364 uagpf v2.0 561
AutoFact: Ribonucleoside-diphosphate reductase n=1 Tax=Musa acuminata RepID=Q6RZW3_MUSAC 0.0
FL-Next: sp=Ribonucleoside-diphosphate reductase large subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribonucleoside-diphosphate reductase large subunit 0.0
C-terminus
uagpf_v2_unigene7744 uagpf v2.0 1136
AutoFact: protein disulfide isomerase [Arabidopsis thaliana] gb|AAL24407.1| Unknown protein [Arabidopsis thaliana] gb|AAM10168.1| unknown protein [Arabidopsis thaliana] gb|ABY91282.1| snowy cotyledon 2 [Arabidopsis thaliana] gb|AEE76210.1| protein disulfide isomera 2.0e-37
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene8072 uagpf v2.0 389
AutoFact: pfam01370, Epimerase, NAD dependent epimerase/dehydratase family 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
C-terminus
uagpf_v2_unigene8347 uagpf v2.0 419
AutoFact: Ribonucleoside-diphosphate reductase n=1 Tax=Musa acuminata RepID=Q6RZW3_MUSAC 0.0
FL-Next: sp=Ribonucleoside-diphosphate reductase large subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribonucleoside-diphosphate reductase large subunit 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain