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Assembly Name: uagpf v2.0

Name: chloroplast organization

Term: GO:0009658  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene43246 uagpf v2.0 297
AutoFact: Ribonucleoside-diphosphate reductase n=1 Tax=Musa acuminata RepID=Q6RZW3_MUSAC 0.0
FL-Next: sp=Ribonucleoside-diphosphate reductase large subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribonucleoside-diphosphate reductase large subunit 0.0
Internal
uagpf_v2_unigene43379 uagpf v2.0 290
AutoFact: RNAse E/G-like protein n=8 Tax=Arabidopsis RepID=F4IV66_ARATH 2.0e-39
FL-Next: tr=At2g04270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rnase e g-like protein 5.60519e-45
Internal
uagpf_v2_unigene44337 uagpf v2.0 313
AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9SJA7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
Internal
uagpf_v2_unigene46011 uagpf v2.0 322
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LS25.1|PP420_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46580, chloroplastic; Flags: Precursor dbj|BAA97529.1| unnamed protein product [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene46050 uagpf v2.0 328
AutoFact: Ribonucleoside-diphosphate reductase n=1 Tax=Musa acuminata RepID=Q6RZW3_MUSAC 0.0
FL-Next: sp=Ribonucleoside-diphosphate reductase large subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribonucleoside-diphosphate reductase large subunit 0.0
Internal
uagpf_v2_unigene46261 uagpf v2.0 364
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SJG4_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family of the mitochondria family 0.0
Internal
uagpf_v2_unigene46701 uagpf v2.0 463
AutoFact: chloroplast protein translocon component Tic40 precursor [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translocon tic40 0.0
Internal
uagpf_v2_unigene46876 uagpf v2.0 390
AutoFact: NifU-like protein 2 [Arabidopsis thaliana] sp|Q93W20.1|NIFU2_ARATH RecName: Full=NifU-like protein 2, chloroplastic; Short=AtCNfu2; Short=AtCnfU-V; Flags: Precursor gb|AAK44168.1|AF370353_1 unknown protein [Arabidopsis thaliana] gb|AAL16167.1|AF428399_1 A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nitrogen fixation protein 0.0
Internal
uagpf_v2_unigene47187 uagpf v2.0 417
AutoFact: Iron-sulfur cluster assembly protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IR30_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at4g01940 t7b11_20 0.0
C-terminus
uagpf_v2_unigene47985 uagpf v2.0 390
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SEX4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: light-regulated zinc finger protein 1 0.0
N-terminus
uagpf_v2_unigene49044 uagpf v2.0 339
AutoFact: RNA binding protein [Arabidopsis thaliana] gb|AAF21211.1|AC013483_35 unknown protein [Arabidopsis thaliana] gb|AAL61923.1| unknown protein [Arabidopsis thaliana] gb|AAN65055.1| unknown protein [Arabidopsis thaliana] gb|AEE74630.1| RNA binding protein [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene49414 uagpf v2.0 276
AutoFact: ribonuclease II-like protein [Arabidopsis thaliana] 5.0e-09
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized ribonuclease sll1290-like 2.6767e-14
Internal
uagpf_v2_unigene50711 uagpf v2.0 452
AutoFact: chloroplast inner envelope protein, 110 kD (IEP110) [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene51097 uagpf v2.0 459
AutoFact: Triosephosphate isomerase n=2 Tax=Picea sitchensis RepID=A9NUV2_PICSI 0.0
FL-Next: sp=Triosephosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: triosephosphate isomerase 0.0
C-terminus
uagpf_v2_unigene51164 uagpf v2.0 574
AutoFact: Mitochondrial carrier protein, putative n=1 Tax=Ricinus communis RepID=B9SW87_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial carrier 0.0
N-terminus
uagpf_v2_unigene51609 uagpf v2.0 316
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NTE8_PICSI 0.0
Blast2go: atp-dependent clp protease proteolytic subunit 0.0
unknown
uagpf_v2_unigene51621 uagpf v2.0 233
AutoFact: pfam01106, NifU, NifU-like domain 6.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nitrogen fixation protein 0.0
Internal
uagpf_v2_unigene52004 uagpf v2.0 615
AutoFact: RuBisCO large subunit-binding protein subunit alpha, chloroplastic n=9 Tax=fabids RepID=RUBA_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ru large subunit-binding protein subunit chloroplastic-like 0.0
N-terminus
uagpf_v2_unigene52474 uagpf v2.0 319
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=D5A7Z0_PICSI 0.0
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit 6, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent clp protease proteolytic subunit 0.0
C-terminus
uagpf_v2_unigene52547 uagpf v2.0 392
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NTE8_PICSI 0.0
Blast2go: atp-dependent clp protease proteolytic subunit 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain