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Assembly Name: uagpf v2.0

Name: chloroplast organization

Term: GO:0009658  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene16141 uagpf v2.0 811
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=D5A7Z0_PICSI 0.0
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent clp protease proteolytic subunit 0.0
C-terminus
uagpf_v2_unigene16609 uagpf v2.0 1023
AutoFact: RecName: Full=Protein TOC75, chloroplastic; AltName: Full=75 kDa chloroplast outer envelope protein; AltName: Full=75 kDa translocon at the outer-envelope membrane of chloroplasts; AltName: Full=Import intermediate-associated protein of 75 kDa; Flags: Pre 0.0
FL-Next: sp=Protein TOC75, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene16727 uagpf v2.0 974
AutoFact: RuBisCO large subunit-binding protein subunit alpha, chloroplastic n=9 Tax=fabids RepID=RUBA_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ru large subunit-binding protein subunit chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene16961 uagpf v2.0 693
AutoFact: chloroplast inner envelope protein, 110 kD (IEP110) [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene18489 uagpf v2.0 555
AutoFact: Mitochondrial carrier protein, putative n=1 Tax=Ricinus communis RepID=B9SW87_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial carrier 0.0
N-terminus
uagpf_v2_unigene19673 uagpf v2.0 1573
AutoFact: pfam08839, CDT1, DNA replication factor CDT1 like 1.0e-28
FL-Next: sp=CDT1-like protein a, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cdt1-like protein chloroplastic-like 7.66257e-39
Putative C-terminus
uagpf_v2_unigene24995 uagpf v2.0 584
AutoFact: Iron-sulfur cluster assembly protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IR30_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at4g01940 t7b11_20 0.0
C-terminus
uagpf_v2_unigene25659 uagpf v2.0 604
AutoFact: Phosphoprotein phosphatase, putative n=1 Tax=Ricinus communis RepID=B9RA78_RICCO 0.0
Blast2go: dual specificity protein phosphatase family protein 0.0
unknown
uagpf_v2_unigene26077 uagpf v2.0 372
AutoFact: PREDICTED: similar to Protein translocase subunit secA, chloroplastic n=1 Tax=Vitis vinifera RepID=UPI0001983A2B 0.0
Blast2go: protein translocase subunit chloroplastic-like 0.0
unknown
uagpf_v2_unigene26409 uagpf v2.0 362
AutoFact: Ribonucleoside-diphosphate reductase n=1 Tax=Musa acuminata RepID=Q6RZW3_MUSAC 0.0
FL-Next: sp=Ribonucleoside-diphosphate reductase large subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribonucleoside-diphosphate reductase large subunit 0.0
Internal
uagpf_v2_unigene26815 uagpf v2.0 413
AutoFact: Translation elongation factor G, putative n=1 Tax=Ricinus communis RepID=B9RBP7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor chloroplastic-like 0.0
N-terminus
uagpf_v2_unigene27485 uagpf v2.0 413
AutoFact: Ribonucleoside-diphosphate reductase n=1 Tax=Musa acuminata RepID=Q6RZW3_MUSAC 0.0
FL-Next: sp=Ribonucleoside-diphosphate reductase large subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribonucleoside-diphosphate reductase large subunit 0.0
N-terminus
uagpf_v2_unigene30022 uagpf v2.0 399
AutoFact: Peptidase M50 family protein [Arabidopsis thaliana] gb|AAK92744.1| unknown protein [Arabidopsis thaliana] gb|AAN71977.1| unknown protein [Arabidopsis thaliana] gb|AED93947.1| Peptidase M50 family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene30827 uagpf v2.0 339
AutoFact: Peptidase M50-like protein n=3 Tax=Arabidopsis RepID=O23053_ARATH 2.0e-29
Blast2go: serine protease 1.95341e-42
unknown
uagpf_v2_unigene31054 uagpf v2.0 264
AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum] 0.0
FL-Next: sp=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
Internal
uagpf_v2_unigene31576 uagpf v2.0 462
AutoFact: Ribonucleoside-diphosphate reductase n=1 Tax=Musa acuminata RepID=Q6RZW3_MUSAC 0.0
Blast2go: ribonucleoside-diphosphate reductase large subunit 0.0
unknown
uagpf_v2_unigene31686 uagpf v2.0 669
AutoFact: Phosphoprotein phosphatase, putative n=1 Tax=Ricinus communis RepID=B9RA78_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dual specificity protein phosphatase family protein 0.0
C-terminus
uagpf_v2_unigene31744 uagpf v2.0 407
AutoFact: RecName: Full=Protein TOC75, chloroplastic; AltName: Full=75 kDa chloroplast outer envelope protein; AltName: Full=75 kDa translocon at the outer-envelope membrane of chloroplasts; AltName: Full=Import intermediate-associated protein of 75 kDa; Flags: Pre 0.0
FL-Next: sp=Protein TOC75-3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene31852 uagpf v2.0 345
AutoFact: Unassigned protein
Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 4.78876e-28
Putative coding
uagpf_v2_unigene34475 uagpf v2.0 317
AutoFact: putative riboflavin biosynthesis protein ribD [Oryza sativa Japonica Group] dbj|BAD21976.1| putative riboflavin biosynthesis protein ribD [Oryza sativa Japonica Group] 0.0
Blast2go: protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain