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Assembly Name: uagpf v2.0

Name: chloroplast organization

Term: GO:0009658  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene8394 uagpf v2.0 635
AutoFact: chloroplast protein translocon component Tic40 precursor [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translocon tic40 0.0
N-terminus
uagpf_v2_unigene8546 uagpf v2.0 882
AutoFact: APO protein 1 [Arabidopsis thaliana] gb|AEE34293.1| APO protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: apo protein 1 0.0
C-terminus
uagpf_v2_unigene8774 uagpf v2.0 380
AutoFact: Glutamyl-tRNA synthetase 1, 2, putative n=1 Tax=Ricinus communis RepID=B9T2L7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamyl-trna synthetase 0.0
N-terminus
uagpf_v2_unigene8848 uagpf v2.0 495
AutoFact: cytidine/deoxycytidylate deaminase-like protein [Arabidopsis thaliana] emb|CAB51211.1| putative protein [Arabidopsis thaliana] gb|AEE78275.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis thaliana] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 5.44267e-34
Internal
uagpf_v2_unigene9011 uagpf v2.0 717
AutoFact: pfam08839, CDT1, DNA replication factor CDT1 like 1.0e-28
FL-Next: sp=CDT1-like protein a, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cdt1-like protein chloroplastic-like 7.66257e-39
C-terminus
uagpf_v2_unigene9102 uagpf v2.0 1013
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene9314 uagpf v2.0 925
AutoFact: chloroplast protein translocon component Tic40 precursor [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translocon tic40 0.0
C-terminus
uagpf_v2_unigene9844 uagpf v2.0 1176
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
Putative N-terminus
uagpf_v2_unigene10568 uagpf v2.0 376
AutoFact: Phosphoprotein phosphatase, putative n=1 Tax=Ricinus communis RepID=B9RA78_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: propyzamide-htpersensitive 1 0.0
Internal
uagpf_v2_unigene10975 uagpf v2.0 224
AutoFact: ATP-binding cassette transporter, subfamily B, member 10, group ATM protein PpABCB10 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TV53_PHYPA 0.0
FL-Next: tr=ATP-binding cassette transporter, subfamily B, member 10, group ATM protein PpABCB10; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: abc transporter-like protein 0.0
C-terminus
uagpf_v2_unigene11017 uagpf v2.0 614
AutoFact: Dynamin central region; Dynamin GTPase effector [Medicago truncatula] 0.0
FL-Next: sp=Dynamin-related protein 3A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dynamin-related protein 3a 0.0
Putative C-terminus
uagpf_v2_unigene11486 uagpf v2.0 570
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
N-terminus
uagpf_v2_unigene11532 uagpf v2.0 473
AutoFact: RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF; AltName: Full=CpFrr; AltName: Full=RRFHCP; AltName: Full=Ribosome-releasing factor, chloroplastic; Flags: Precursor emb|CAB41419.1| chloroplast ribosome recycling factor protein [Spinacia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosome-recycling factor 0.0
Internal
uagpf_v2_unigene11902 uagpf v2.0 712
AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene12122 uagpf v2.0 695
AutoFact: pfam01106, NifU, NifU-like domain 6.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nitrogen fixation protein 0.0
C-terminus
uagpf_v2_unigene12330 uagpf v2.0 508
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NTE8_PICSI 0.0
Blast2go: atp-dependent clp protease proteolytic subunit 0.0
unknown
uagpf_v2_unigene13636 uagpf v2.0 529
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pale cress protein 0.0
C-terminus
uagpf_v2_unigene14079 uagpf v2.0 526
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene15491 uagpf v2.0 1705
AutoFact: Triosephosphate isomerase n=2 Tax=Picea sitchensis RepID=A9NUV2_PICSI 0.0
FL-Next: sp=Triosephosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: triosephosphate isomerase 0.0
Complete
uagpf_v2_unigene15611 uagpf v2.0 418
AutoFact: Phosphoprotein phosphatase, putative n=1 Tax=Ricinus communis RepID=B9RA78_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dual specificity protein phosphatase family protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain