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Assembly Name: uagpf v2.0

Name: nuclear speck

Term: GO:0016607  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene17781 uagpf v2.0 724
AutoFact: Arginine/serine-rich splicing factor, putative n=1 Tax=Ricinus communis RepID=B9SAR0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-splicing factor sf2 0.0
C-terminus
uagpf_v2_unigene17784 uagpf v2.0 250
AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine serine-rich-splicing factor rsp41 0.0
Putative Complete
uagpf_v2_unigene19427 uagpf v2.0 1065
AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine serine-rich-splicing factor rsp40 0.0
C-terminus
uagpf_v2_unigene28019 uagpf v2.0 425
AutoFact: U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] ref|NP_849600.1| U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] gb|AAF80219.1|AC025290_8 Contains similarity to an U5 snRNP-specific protein 116 kD from Homo sapiens 0.0
FL-Next: sp=Elongation factor 2; Blastocystis hominis. 0.0
Blast2go: u5 small nuclear ribonucleoprotein component 0.0
Internal
uagpf_v2_unigene28170 uagpf v2.0 573
AutoFact: Isoform 2 of Serine/threonine-protein phosphatase 5 n=1 Tax=Solanum lycopersicum RepID=Q84K11-2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein phosphatase 5 0.0
Internal
uagpf_v2_unigene33834 uagpf v2.0 398
AutoFact: RecName: Full=Putative N6-adenosine-methyltransferase MT-A70-like gb|ABD28511.1| MT-A70 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: n6-adenosine-methyltransferase mt-a70-like protein 0.0
Internal
uagpf_v2_unigene36322 uagpf v2.0 719
AutoFact: Arsenite-resistance protein, putative n=1 Tax=Ricinus communis RepID=B9S6M6_RICCO 0.0
Blast2go: serrate rna effector molecule-like 0.0
unknown
uagpf_v2_unigene36967 uagpf v2.0 439
AutoFact: RecName: Full=Putative N6-adenosine-methyltransferase MT-A70-like gb|ABD28511.1| MT-A70 [Medicago truncatula] 0.0
Blast2go: n6-adenosine-methyltransferase mt-a70-like protein 0.0
unknown
uagpf_v2_unigene37674 uagpf v2.0 298
AutoFact: RecName: Full=Putative N6-adenosine-methyltransferase MT-A70-like gb|ABD28511.1| MT-A70 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: n6-adenosine-methyltransferase mt-a70-like protein 0.0
Putative C-terminus
uagpf_v2_unigene38852 uagpf v2.0 275
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SEX4_RICCO 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: light-regulated zinc finger protein 1 0.0
Internal
uagpf_v2_unigene41215 uagpf v2.0 316
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SEX4_RICCO 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: light-regulated zinc finger protein 1 0.0
Internal
uagpf_v2_unigene46461 uagpf v2.0 350
AutoFact: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Arabidopsis thaliana] sp|O22212.1|PRP4_ARATH RecName: Full=U4/U6 small nuclear ribonucleoprotein PRP4-like protein; AltName: Full=Protein EMBRYO DEFECTIVE 2776 gb|AAB84332.1| putative small nuclear 0.0
FL-Next: sp=U4/U6 small nuclear ribonucleoprotein PRP4-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: u4 u6 small nuclear ribonucleoprotein prp4-like 0.0
Internal
uagpf_v2_unigene47985 uagpf v2.0 390
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SEX4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: light-regulated zinc finger protein 1 0.0
N-terminus
uagpf_v2_unigene52172 uagpf v2.0 391
AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine serine-rich-splicing factor rsp41 0.0
C-terminus
uagpf_v2_unigene52892 uagpf v2.0 422
AutoFact: Arginine/serine-rich splicing factor, putative n=1 Tax=Ricinus communis RepID=B9SAR0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-splicing factor sf2 0.0
Internal
uagpf_v2_unigene52964 uagpf v2.0 371
AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine serine-rich-splicing factor rsp40 0.0
N-terminus
uagpf_v2_unigene53002 uagpf v2.0 430
AutoFact: putative arginine/serine-rich protein [Arabidopsis thaliana] 9.99967e-42
Blast2go: protein arginine serine-rich 45 0.0
Coding
uagpf_v2_unigene54960 uagpf v2.0 389
AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
Blast2go: arginine serine-rich-splicing factor rsp40-like 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain