Sustainpine_db
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Assembly Name: uagpf v2.0

Name: SCF ubiquitin ligase complex

Term: GO:0019005  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene620 uagpf v2.0 656
AutoFact: F-box/leucine rich repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S4S5_RICCO 6.0e-15
FL-Next: sp=F-box/LRR-repeat protein 17; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box lrr-repeat protein 17-like 1.2595e-16
Internal
uagpf_v2_unigene1543 uagpf v2.0 774
AutoFact: TIR1/AFB auxin receptor protein PintaTIR1 n=1 Tax=Pinus taeda RepID=C9EHS7_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaTIR1; Pinus taeda (Loblolly pine). 0.0
Blast2go: transport inhibitor response 1 0.0
C-terminus
uagpf_v2_unigene2063 uagpf v2.0 403
AutoFact: cullin 3 [Arabidopsis thaliana] sp|Q9ZVH4.1|CUL3A_ARATH RecName: Full=Cullin-3A; Short=AtCUL3a gb|AAF87034.1|AC006535_12 T24P13.25 [Arabidopsis thaliana] gb|AAD14503.1| Highly similar to cullin 3 [Arabidopsis thaliana] emb|CAC87120.1| cullin 3a [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cullin 3 0.0
Internal
uagpf_v2_unigene2111 uagpf v2.0 1184
AutoFact: TIR1/AFB auxin receptor protein PintaTIR1 n=1 Tax=Pinus taeda RepID=C9EHS7_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaTIR1; Pinus taeda (Loblolly pine). 0.0
Blast2go: transport inhibitor response 1 0.0
Internal
uagpf_v2_unigene4495 uagpf v2.0 768
AutoFact: ZEITLUPE n=1 Tax=Mesembryanthemum crystallinum RepID=Q6UEI5_MESCR 0.0
FL-Next: sp=Adagio-like protein 3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: adagio protein 1 0.0
C-terminus
uagpf_v2_unigene5526 uagpf v2.0 738
AutoFact: cullin 3 [Arabidopsis thaliana] sp|Q9ZVH4.1|CUL3A_ARATH RecName: Full=Cullin-3A; Short=AtCUL3a gb|AAF87034.1|AC006535_12 T24P13.25 [Arabidopsis thaliana] gb|AAD14503.1| Highly similar to cullin 3 [Arabidopsis thaliana] emb|CAC87120.1| cullin 3a [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene7002 uagpf v2.0 632
AutoFact: Putative F-box GID2 protein n=1 Tax=Selaginella moellendorffii RepID=A9LY18_SELML 5.0e-18
FL-Next: sp=F-box protein SNE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein sne 8.26759e-22
Complete
uagpf_v2_unigene7050 uagpf v2.0 867
AutoFact: cullin 3 [Arabidopsis thaliana] sp|Q9ZVH4.1|CUL3A_ARATH RecName: Full=Cullin-3A; Short=AtCUL3a gb|AAF87034.1|AC006535_12 T24P13.25 [Arabidopsis thaliana] gb|AAD14503.1| Highly similar to cullin 3 [Arabidopsis thaliana] emb|CAC87120.1| cullin 3a [Arabidops 0.0
Blast2go: cullin 3 0.0
unknown
uagpf_v2_unigene9875 uagpf v2.0 567
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9RDT2_RICCO 0.0
Blast2go: skp1-like protein 21-like 0.0
Putative coding
uagpf_v2_unigene10565 uagpf v2.0 599
AutoFact: ZEITLUPE n=1 Tax=Mesembryanthemum crystallinum RepID=Q6UEI5_MESCR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adagio protein 1 0.0
Putative N-terminus
uagpf_v2_unigene12723 uagpf v2.0 894
AutoFact: PREDICTED: similar to F-box-containing protein 2 n=2 Tax=Vitis vinifera RepID=UPI000198358B 0.0
FL-Next: sp=F-box protein SKIP16; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein skip16 0.0
C-terminus
uagpf_v2_unigene13693 uagpf v2.0 304
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q5EAF6.1|FB336_ARATH RecName: Full=Probable F-box protein At5g04010; AltName: Full=Non-specific F-box protein gb|AAW81721.1| At5g04010 [Arabidopsis thaliana] gb|AED90684.1| F-box protein [Arabidopsis thaliana] 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
Putative C-terminus
uagpf_v2_unigene13721 uagpf v2.0 436
AutoFact: PREDICTED: similar to F-box-containing protein 2 n=2 Tax=Vitis vinifera RepID=UPI000198358B 0.0
FL-Next: sp=F-box protein SKIP16; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein skip16 0.0
N-terminus
uagpf_v2_unigene14969 uagpf v2.0 1324
AutoFact: Coronatine-insensitive protein, putative n=1 Tax=Ricinus communis RepID=B9SWQ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coronitine insensitive 1 0.0
C-terminus
uagpf_v2_unigene15677 uagpf v2.0 438
AutoFact: RING-box protein 1a n=7 Tax=rosids RepID=RBX1A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-box protein 0.0
C-terminus
uagpf_v2_unigene16085 uagpf v2.0 877
AutoFact: F-box/LRR-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9STU0_RICCO 0.0
FL-Next: sp=F-box protein SKIP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein skip1 0.0
C-terminus
uagpf_v2_unigene16313 uagpf v2.0 604
AutoFact: PREDICTED: similar to F-box-containing protein 2 n=2 Tax=Vitis vinifera RepID=UPI000198358B 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein skip16 0.0
C-terminus
uagpf_v2_unigene18980 uagpf v2.0 416
AutoFact: Putative F-box GID2 protein n=1 Tax=Selaginella moellendorffii RepID=A9LY18_SELML 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein gid2-like 0.0
N-terminus
uagpf_v2_unigene25452 uagpf v2.0 417
AutoFact: RING-box protein 1a n=7 Tax=rosids RepID=RBX1A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-box protein 0.0
N-terminus
uagpf_v2_unigene27802 uagpf v2.0 346
AutoFact: Putative F-box GID2 protein n=1 Tax=Selaginella moellendorffii RepID=A9LY18_SELML 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein gid2-like 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain