Sustainpine_db
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Assembly Name: uagpf v2.0

Name: red, far-red light phototransduction

Term: GO:0009585  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene33862 uagpf v2.0 235
AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
FL-Next: sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytochrome 0.0
Internal
uagpf_v2_unigene34909 uagpf v2.0 290
AutoFact: Heme oxygenase 1 n=2 Tax=Pinaceae RepID=Q94FW5_PINTA 0.0
Blast2go: heme oxygenase 1 protein 2 0.0
Putative coding
uagpf_v2_unigene38049 uagpf v2.0 388
AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
Blast2go: phytochrome 0.0
unknown
uagpf_v2_unigene38361 uagpf v2.0 436
AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 0.0
FL-Next: sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytochrome p 0.0
Putative N-terminus
uagpf_v2_unigene38931 uagpf v2.0 273
AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
Blast2go: phytochrome 0.0
Internal
uagpf_v2_unigene45239 uagpf v2.0 358
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome 0.0
Internal
uagpf_v2_unigene46454 uagpf v2.0 356
AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
FL-Next: sp=DNA damage-binding protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: dna damage-binding protein 1a 0.0
Internal
uagpf_v2_unigene46797 uagpf v2.0 374
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome o 0.0
Internal
uagpf_v2_unigene47750 uagpf v2.0 399
AutoFact: pfam11265, Med25_VWA, Mediator complex subunit 25 von Willebrand factor type A 8.0e-18
FL-Next: tr=Phytochrome and flowering time protein 1; Triticum aestivum (Wheat). 0.0
Blast2go: phytochrome and flowering time regulatory protein 1 1.44902e-31
N-terminus
uagpf_v2_unigene53275 uagpf v2.0 447
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Ricinus communis RepID=B9RAM1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleoside diphosphate kinase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain