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Assembly Name: uagpf v2.0

Name: cellular macromolecule biosynthetic process

Term: GO:0034645  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene189 uagpf v2.0 756
• AutoFact: putative transcription initiation factor [Oryza sativa Japonica Group] gb|ABB46979.1| mutant TFIIF-alpha, putative, expressed [Oryza sativa Japonica Group] 2.0e-32
• FL-Next: Isoform 2 of Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74 0.0
• Blast2go: transcription initiation factor iif subunit alpha 7.42688e-44
C-terminus
uagpf_v2_unigene4320 uagpf v2.0 640
• AutoFact: Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] ref|NP_172228.3| Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAR28029.1| TFIIA-L1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor transcription initiation factor 0.0
Internal
uagpf_v2_unigene6955 uagpf v2.0 527
• AutoFact: putative transcription initiation factor [Oryza sativa Japonica Group] gb|ABB46979.1| mutant TFIIF-alpha, putative, expressed [Oryza sativa Japonica Group] 2.0e-32
• FL-Next: Isoform 2 of Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74 0.0
• Blast2go: transcription initiation factor iif subunit alpha 7.42688e-44
C-terminus
uagpf_v2_unigene8630 uagpf v2.0 321
• AutoFact: TBP-associated factor 4 [Arabidopsis thaliana] gb|AAR21620.1| TATA-binding protein associated factor 4b [Arabidopsis thaliana] dbj|BAF01312.1| hypothetical protein [Arabidopsis thaliana] gb|AED94913.1| TBP-associated factor 4 [Arabidopsis thaliana] 0.0
• Blast2go: transcription initiation 0.0
unknown
uagpf_v2_unigene10164 uagpf v2.0 295
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TI03_VITVI 2.0e-39
• FL-Next: sp=DNA-directed RNA polymerase; Pinus pinaster (Maritime pine). Plastid; Chloroplast. 0.0
• Blast2go: dna-directed rna polymerase i subunit rpa1-like 1.4013e-45
Internal
uagpf_v2_unigene12085 uagpf v2.0 588
• AutoFact: Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] ref|NP_172228.3| Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAR28029.1| TFIIA-L1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor transcription initiation factor 0.0
Putative N-terminus
uagpf_v2_unigene14359 uagpf v2.0 678
• AutoFact: Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] ref|NP_172228.3| Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAR28029.1| TFIIA-L1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor transcription initiation factor 0.0
C-terminus
uagpf_v2_unigene18407 uagpf v2.0 820
• AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s acidic ribosomal protein p0 0.0
N-terminus
uagpf_v2_unigene19312 uagpf v2.0 496
• AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
• FL-Next: sp=60S acidic ribosomal protein P0; Zea mays (Maize). 0.0
• Blast2go: 60s acidic ribosomal protein p0 0.0
N-terminus
uagpf_v2_unigene19651 uagpf v2.0 778
• AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s acidic ribosomal protein p0 0.0
C-terminus
uagpf_v2_unigene20105 uagpf v2.0 965
• AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s acidic ribosomal protein p0 0.0
C-terminus
uagpf_v2_unigene33734 uagpf v2.0 367
• AutoFact: WS0286.B21_F03 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS0286_F03 5, mRNA sequence. 0.0
• Blast2go: bromodomain adjacent to zinc finger domain protein 2b 8.00455e-17
Coding
uagpf_v2_unigene36682 uagpf v2.0 319
• AutoFact: putative transcription initiation factor [Oryza sativa Japonica Group] gb|ABB46979.1| mutant TFIIF-alpha, putative, expressed [Oryza sativa Japonica Group] 2.0e-32
• FL-Next: Isoform 2 of Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74 0.0
• Blast2go: transcription initiation factor iif subunit alpha 7.42688e-44
Internal
uagpf_v2_unigene39229 uagpf v2.0 297
• AutoFact: TBP-associated factor 4 [Arabidopsis thaliana] gb|AAR21620.1| TATA-binding protein associated factor 4b [Arabidopsis thaliana] dbj|BAF01312.1| hypothetical protein [Arabidopsis thaliana] gb|AED94913.1| TBP-associated factor 4 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: transcription initiation 0.0
Internal
uagpf_v2_unigene48961 uagpf v2.0 288
• AutoFact: TBP-associated factor 4 [Arabidopsis thaliana] gb|AAR21620.1| TATA-binding protein associated factor 4b [Arabidopsis thaliana] dbj|BAF01312.1| hypothetical protein [Arabidopsis thaliana] gb|AED94913.1| TBP-associated factor 4 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: transcription initiation 0.0
Internal
uagpf_v2_unigene49927 uagpf v2.0 491
• AutoFact: putative transcription initiation factor [Oryza sativa Japonica Group] gb|ABB46979.1| mutant TFIIF-alpha, putative, expressed [Oryza sativa Japonica Group] 2.0e-32
• FL-Next: Isoform 2 of Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74 0.0
• Blast2go: transcription initiation factor iif subunit alpha 7.42688e-44
C-terminus
uagpf_v2_unigene52335 uagpf v2.0 274
• AutoFact: Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] ref|NP_172228.3| Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAR28029.1| TFIIA-L1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor transcription initiation factor 0.0
C-terminus
uagpf_v2_unigene52565 uagpf v2.0 240
• AutoFact: putative transcription initiation factor [Oryza sativa Japonica Group] gb|ABB46979.1| mutant TFIIF-alpha, putative, expressed [Oryza sativa Japonica Group] 2.0e-32
• FL-Next: Isoform 2 of Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74 0.0
• Blast2go: transcription initiation factor iif subunit alpha 7.42688e-44
Internal
uagpf_v2_unigene53140 uagpf v2.0 243
• AutoFact: transcription initiation factor TFIIA large subunit [Arabidopsis thaliana] gb|AAL11553.1|AF424559_1 At1g07470/F22G5_13 [Arabidopsis thaliana] gb|AAK64164.1| putative transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAK83596.1| At1g07470/F2 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor transcription initiation factor 0.0
Internal
uagpf_v2_unigene53932 uagpf v2.0 467
• AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s acidic ribosomal protein p0 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain