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Assembly Name: uagpf v2.0

Name: positive regulation of transcription, DNA-dependent

Term: GO:0045893  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene175 uagpf v2.0 1395
AutoFact: mitogen-activated protein kinase 2 [Nicotiana tabacum] 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene623 uagpf v2.0 202
AutoFact: plastid transcriptionally active 12 [Arabidopsis thaliana] gb|AEC09002.1| plastid transcriptionally active 12 [Arabidopsis thaliana] 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid transcriptionally active 12 0.0
N-terminus
uagpf_v2_unigene1363 uagpf v2.0 681
AutoFact: Inducer of CBF expression 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZF3_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor ice1 0.0
C-terminus
uagpf_v2_unigene1562 uagpf v2.0 1519
AutoFact: PAF1 complex component n=2 Tax=Populus trichocarpa RepID=B9HYK9_POPTR 0.0
FL-Next: tr=Paf1 complex protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: rna polymerase-associated protein rtf1 homolog 0.0
N-terminus
uagpf_v2_unigene1768 uagpf v2.0 387
AutoFact: Inducer of CBF expression 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZF3_PICAB 0.0
Blast2go: transcription factor ice1 0.0
unknown
uagpf_v2_unigene2234 uagpf v2.0 781
AutoFact: RNA polymerase II transcription mediator [Arabidopsis thaliana] gb|AAF04900.1|AC011437_15 hypothetical protein [Arabidopsis thaliana] gb|AAM09647.1|AF466359_1 SWP1 [Arabidopsis thaliana] emb|CAD53582.1| struwwelpeter 1 protein [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase ii transcription mediator 0.0
Putative Complete
uagpf_v2_unigene3047 uagpf v2.0 493
AutoFact: PAF1 complex component n=2 Tax=Populus trichocarpa RepID=B9HYK9_POPTR 0.0
Blast2go: rna polymerase-associated protein rtf1 homolog 0.0
Coding
uagpf_v2_unigene3374 uagpf v2.0 442
AutoFact: NAC domain-containing protein 78 [Arabidopsis thaliana] sp|Q84K00.2|NAC78_ARATH RecName: Full=NAC domain-containing protein 78; Short=ANAC078 emb|CAB85547.1| putative protein [Arabidopsis thaliana] gb|AAM20460.1| putative protein [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
N-terminus
uagpf_v2_unigene3386 uagpf v2.0 607
AutoFact: putative MYC transcription factor [Oryza sativa Japonica Group] 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 0.0
C-terminus
uagpf_v2_unigene3602 uagpf v2.0 389
AutoFact: putative TPR-containing nuclear phosphoprotein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase-associated protein ctr9 homolog 0.0
N-terminus
uagpf_v2_unigene3725 uagpf v2.0 407
AutoFact: NAC domain-containing protein 78 [Arabidopsis thaliana] sp|Q84K00.2|NAC78_ARATH RecName: Full=NAC domain-containing protein 78; Short=ANAC078 emb|CAB85547.1| putative protein [Arabidopsis thaliana] gb|AAM20460.1| putative protein [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
Internal
uagpf_v2_unigene3955 uagpf v2.0 462
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper family protein 0.0
Internal
uagpf_v2_unigene4622 uagpf v2.0 478
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RY52_RICCO 0.0
FL-Next: sp=PHD finger protein At1g33420; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 0.0
Internal
uagpf_v2_unigene5221 uagpf v2.0 450
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 3.0e-33
Blast2go: homeobox-leucine zipper family protein 0.0
unknown
uagpf_v2_unigene5443 uagpf v2.0 998
AutoFact: bZIP DNA-binding protein [Petroselinum crispum] 0.0
Blast2go: bzip domain class transcription factor 0.0
unknown
uagpf_v2_unigene5911 uagpf v2.0 905
AutoFact: PAF1 complex component n=2 Tax=Populus trichocarpa RepID=B9HYK9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna polymerase-associated protein rtf1 homolog 0.0
C-terminus
uagpf_v2_unigene5976 uagpf v2.0 623
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper family protein 0.0
Internal
uagpf_v2_unigene7802 uagpf v2.0 688
AutoFact: phytochrome and flowering time regulatory protein 1 [Arabidopsis thaliana] gb|AEE30640.1| phytochrome and flowering time regulatory protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytochrome and flowering time regulatory protein 1 0.0
Internal
uagpf_v2_unigene8487 uagpf v2.0 1038
AutoFact: Ethylene-responsive-element-binding factor 12 n=1 Tax=Petunia x hybrida RepID=E3VVS1_PETHY 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene responsive element binding factor 2 1.52593e-34
Putative Complete
uagpf_v2_unigene8691 uagpf v2.0 593
AutoFact: bZIP DNA-binding protein [Petroselinum crispum] 0.0
FL-Next: tr=BZIP transcriptional repressor ROM1; Phaseolus vulgaris (Kidney bean) (French bean). 0.0
Blast2go: bzip domain class transcription factor 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain