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Assembly Name: uagpf v2.0

Name: positive regulation of transcription, DNA-dependent

Term: GO:0045893  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene10669 uagpf v2.0 410
AutoFact: homeobox protein HAT3.1 [Arabidopsis thaliana] sp|Q04996.3|HAT31_ARATH RecName: Full=Homeobox protein HAT3.1 dbj|BAC41784.1| putative homeobox protein HAT3.1 [Arabidopsis thaliana] gb|AAO64900.1| At3g19510 [Arabidopsis thaliana] gb|AEE76250.1| homeobox pr 0.0
FL-Next: sp=Pathogenesis-related homeodomain protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: homeobox protein 0.0
Internal
uagpf_v2_unigene10805 uagpf v2.0 574
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RY52_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Putative C-terminus
uagpf_v2_unigene12422 uagpf v2.0 381
AutoFact: putative MYC transcription factor [Oryza sativa Japonica Group] 1.99965e-42
Blast2go: transcription factor 0.0
unknown
uagpf_v2_unigene12442 uagpf v2.0 641
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene12978 uagpf v2.0 691
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper family protein 0.0
C-terminus
uagpf_v2_unigene13808 uagpf v2.0 531
AutoFact: putative myosin [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: myosin-like protein 0.0
Internal
uagpf_v2_unigene14634 uagpf v2.0 667
AutoFact: putative MYC transcription factor [Oryza sativa Japonica Group] 1.99965e-42
Blast2go: transcription factor 0.0
unknown
uagpf_v2_unigene14721 uagpf v2.0 1004
AutoFact: bZIP DNA-binding protein [Petroselinum crispum] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: bzip domain class transcription factor 0.0
C-terminus
uagpf_v2_unigene15021 uagpf v2.0 418
AutoFact: NAC domain containing protein 2 [Arabidopsis thaliana] gb|AAF35417.1| putative jasmonic acid regulatory protein [Arabidopsis thaliana] dbj|BAB20600.1| AtNAC2 [Arabidopsis thaliana] dbj|BAB02380.1| jasmonic acid regulatory protein-like [Arabidopsis thalian 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nam-like protein 0.0
N-terminus
uagpf_v2_unigene15139 uagpf v2.0 766
AutoFact: NAC domain-containing protein 78 [Arabidopsis thaliana] sp|Q84K00.2|NAC78_ARATH RecName: Full=NAC domain-containing protein 78; Short=ANAC078 emb|CAB85547.1| putative protein [Arabidopsis thaliana] gb|AAM20460.1| putative protein [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
C-terminus
uagpf_v2_unigene17050 uagpf v2.0 1455
AutoFact: NAC domain-containing protein 78 [Arabidopsis thaliana] sp|Q84K00.2|NAC78_ARATH RecName: Full=NAC domain-containing protein 78; Short=ANAC078 emb|CAB85547.1| putative protein [Arabidopsis thaliana] gb|AAM20460.1| putative protein [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
N-terminus
uagpf_v2_unigene17205 uagpf v2.0 547
AutoFact: Histone acetyltransferase gcn5, putative n=1 Tax=Ricinus communis RepID=B9S4R6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
C-terminus
uagpf_v2_unigene17742 uagpf v2.0 333
AutoFact: transcription factor-like protein [Arabidopsis thaliana] gb|AED90905.1| transcription factor-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=NF-X1-type zinc finger protein NFXL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nuclear transcription x-box 0.0
Internal
uagpf_v2_unigene25619 uagpf v2.0 442
AutoFact: bZIP DNA-binding protein [Petroselinum crispum] 0.0
Blast2go: transcription factor hbp-1a 0.0
unknown
uagpf_v2_unigene25961 uagpf v2.0 429
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 3.0e-33
Blast2go: homeobox-leucine zipper family protein 0.0
unknown
uagpf_v2_unigene26133 uagpf v2.0 256
AutoFact: plastid transcriptionally active 6 [Arabidopsis thaliana] ref|NP_001031076.1| plastid transcriptionally active 6 [Arabidopsis thaliana] gb|AAD41412.1|AC007727_1 EST gb|N95925 comes from this gene [Arabidopsis thaliana] gb|AAG40066.1|AF324715_1 At1g21600 [ 0.0
Blast2go: plastid transcriptionally active 6 0.0
unknown
uagpf_v2_unigene26482 uagpf v2.0 347
AutoFact: homeobox protein HAT3.1 [Arabidopsis thaliana] sp|Q04996.3|HAT31_ARATH RecName: Full=Homeobox protein HAT3.1 dbj|BAC41784.1| putative homeobox protein HAT3.1 [Arabidopsis thaliana] gb|AAO64900.1| At3g19510 [Arabidopsis thaliana] gb|AEE76250.1| homeobox pr 0.0
Blast2go: homeobox protein 0.0
Coding
uagpf_v2_unigene26515 uagpf v2.0 231
AutoFact: putative TPR-containing nuclear phosphoprotein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna polymerase-associated protein ctr9 homolog 0.0
Internal
uagpf_v2_unigene27347 uagpf v2.0 717
AutoFact: [L] COG0708 Exonuclease III 0.0
FL-Next: sp=Apurinic endonuclease-redox protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: apurinic endonuclease-redox protein 0.0
C-terminus
uagpf_v2_unigene27528 uagpf v2.0 469
AutoFact: pfam00069, Pkinase, Protein kinase domain 1.0e-14
Blast2go: mitogen-activated protein kinase kinase 3.05138e-22
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain