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Assembly Name: uagpf v2.0

Name: plastid chromosome

Term: GO:0009508  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene36824 uagpf v2.0 549
AutoFact: plastid transcriptionally active 17 protein [Arabidopsis thaliana] gb|AAF27129.1|AC018849_17 hypothetical protein; 58060-60358 [Arabidopsis thaliana] gb|AAT47799.1| At1g80480 [Arabidopsis thaliana] gb|AAU05519.1| At1g80480 [Arabidopsis thaliana] gb|AEE364 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cobw domain-containing protein 2-like isoform 2 0.0
N-terminus
uagpf_v2_unigene38708 uagpf v2.0 537
AutoFact: cobW multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: prli-interacting factor 0.0
Internal
uagpf_v2_unigene39097 uagpf v2.0 336
AutoFact: plastid transcriptionally active 2 [Arabidopsis thaliana] sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor gb|AAD55291.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene39504 uagpf v2.0 484
AutoFact: protein plastid transcriptionally active 5 [Arabidopsis thaliana] gb|ABL66797.1| At4g13670 [Arabidopsis thaliana] gb|AEE83311.1| protein plastid transcriptionally active 5 [Arabidopsis thaliana] 6.0e-39
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 1.5162e-42
Internal
uagpf_v2_unigene39918 uagpf v2.0 372
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R902_RICCO 4.0e-39
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 1.4013e-45
Putative N-terminus
uagpf_v2_unigene48444 uagpf v2.0 375
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7T9R5_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: at4g20130-like protein 0.0
Internal
uagpf_v2_unigene49900 uagpf v2.0 498
AutoFact: PSI-P; PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding 8.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene52072 uagpf v2.0 380
AutoFact: PSI-P; PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding 8.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene53222 uagpf v2.0 518
AutoFact: ssDNA-binding transcriptional regulator [Arabidopsis thaliana] gb|AAF43941.1|AC012188_18 Contains similarity to a hypothetical protein from Arabidopsis thaliana gb|AC002521.2. EST gb|AI995686 comes from this gene gb|AAG48815.1|AF332452_1 putative DNA-bind 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ssdna-binding transcriptional regulator 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain