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Assembly Name: uagpf v2.0

Name: intracellular

Term: GO:0005622  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene28282 uagpf v2.0 406
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger partial 0.0
Putative N-terminus
uagpf_v2_unigene28537 uagpf v2.0 504
• AutoFact: uncharacterized protein [Arabidopsis thaliana] dbj|BAA97379.1| unnamed protein product [Arabidopsis thaliana] gb|AAM67022.1| unknown [Arabidopsis thaliana] gb|AAO42327.1| unknown protein [Arabidopsis thaliana] gb|AAO64010.1| unknown protein [Arabidopsis t 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
C-terminus
uagpf_v2_unigene29192 uagpf v2.0 359
• AutoFact: ARID/BRIGHT DNA-binding domain-containing protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7L9D8_ARALL 9.99995e-41
• Blast2go: arid bright dna-binding domain-containing protein 1.68156e-44
unknown
uagpf_v2_unigene29292 uagpf v2.0 451
• AutoFact: U4/U6.U5 tri-snRNP component [Arabidopsis thaliana] gb|AAK62582.1| AT3g05760/F10A16_5 [Arabidopsis thaliana] gb|AAK96449.1| AT3g05760/F10A16_5 [Arabidopsis thaliana] gb|AEE74293.1| U4/U6.U5 tri-snRNP component [Arabidopsis thaliana] 0.0
• Blast2go: u4 tri-snrnp component 0.0
Putative coding
uagpf_v2_unigene29379 uagpf v2.0 601
• AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 9.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: werner syndrome-like exonuclease-like 0.0
N-terminus
uagpf_v2_unigene29463 uagpf v2.0 277
• AutoFact: GTP-binding protein-relatedlike protein n=2 Tax=Arabidopsis RepID=Q9SVA6_ARATH 0.0
• Blast2go: developmentally-regulated gtp-binding protein 1 0.0
unknown
uagpf_v2_unigene29484 uagpf v2.0 287
• AutoFact: putative GTPase activator protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tbc domain-containing protein 0.0
C-terminus
uagpf_v2_unigene30027 uagpf v2.0 364
• AutoFact: DUF1666 domain containing protein 5.0e-20
• Blast2go: uncharacterized protein loc100249284 1.36628e-16
unknown
uagpf_v2_unigene30456 uagpf v2.0 688
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7C4_RICCO 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
N-terminus
uagpf_v2_unigene30499 uagpf v2.0 435
• AutoFact: ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] gb|AAN31917.1| unknown protein [Arabidopsis thaliana] dbj|BAE98689.1| hypothetical protein [Arabidopsis thaliana] gb|AEE84587.1| ubiquitin carboxyl-terminal hydrolase-like protein [ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene30502 uagpf v2.0 702
• AutoFact: HD2 type histone deacetylase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RGA1_PHYPA 4.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hd2 type histone deacetylase 0.0
C-terminus
uagpf_v2_unigene30702 uagpf v2.0 415
• AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] dbj|BAD44199.1| GTPase activator protein of Rab-like small GTPases-like protein [Arabidopsis thaliana] gb|AED94745.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gtpase-activating protein gyp7-like 0.0
Internal
uagpf_v2_unigene30853 uagpf v2.0 355
• AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
• FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI8; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable e3 ubiquitin-protein ligase ari7-like 0.0
Internal
uagpf_v2_unigene30871 uagpf v2.0 265
• AutoFact: E3 ubiquitin-protein ligase UPL5 [Arabidopsis thaliana] sp|Q9SU29.1|UPL5_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL5; Short=Ubiquitin-protein ligase 5 emb|CAB41727.2| polyubiquitin-like protein [Arabidopsis thaliana] emb|CAB78300.1| polyubiquitin 7.0e-20
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: e3 ubiquitin-protein ligase upl5-like 0.0
Internal
uagpf_v2_unigene30920 uagpf v2.0 249
• AutoFact: EPF-type Cis2-His2 zinc finger transcription factor n=2 Tax=Selaginella moellendorffii RepID=D8RG79_SELML 4.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger protein 0.0
C-terminus
uagpf_v2_unigene31480 uagpf v2.0 521
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RBH0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger protein 511 0.0
Internal
uagpf_v2_unigene31499 uagpf v2.0 309
• AutoFact: Rac-like GTP-binding protein 3 n=4 Tax=BEP clade RepID=RAC3_ORYSJ 0.0
• Blast2go: small gtpase 0.0
unknown
uagpf_v2_unigene31679 uagpf v2.0 328
• AutoFact: putative HECT ubiquitin-protein ligase 3 [Oryza sativa Japonica Group] dbj|BAD08189.1| putative HECT ubiquitin-protein ligase 3 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase upl3-like 0.0
C-terminus
uagpf_v2_unigene32284 uagpf v2.0 299
• AutoFact: CCT domain containing protein 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger protein at1g68190-like 0.0
C-terminus
uagpf_v2_unigene32911 uagpf v2.0 440
• AutoFact: HAT family dimerisation domain containing protein n=2 Tax=Oryza sativa RepID=Q2R1C3_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: hat dimerisation domain-containing 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain