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Assembly Name: uagpf v2.0

Name: intracellular

Term: GO:0005622  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene15218 uagpf v2.0 666
AutoFact: Ribosomal_S21 domain containing protein 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 5.97628e-33
C-terminus
uagpf_v2_unigene15363 uagpf v2.0 691
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
C-terminus
uagpf_v2_unigene15364 uagpf v2.0 671
AutoFact: WS01018.B21_E24 SS-R-N-A-11 Picea sitchensis cDNA clone WS01018_E24 3', mRNA sequence. 0.0
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene16422 uagpf v2.0 434
AutoFact: LIM domain protein WLIM-1 [Helianthus annuus] 0.0
Blast2go: pollen-specific protein 0.0
unknown
uagpf_v2_unigene16426 uagpf v2.0 602
AutoFact: Embryonic flower 2 n=1 Tax=Yucca filamentosa RepID=Q1W6L0_YUCFI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: embryonic flower 2 0.0
Putative Complete
uagpf_v2_unigene16507 uagpf v2.0 606
AutoFact: Ras-related protein Rab-18 n=4 Tax=Poaceae RepID=B6TCF9_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rab-18 0.0
C-terminus
uagpf_v2_unigene16592 uagpf v2.0 439
AutoFact: PREDICTED: similar to TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor isoform 6 [Canis familiaris] 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.582e-37
Putative Complete
uagpf_v2_unigene16690 uagpf v2.0 707
AutoFact: 50S ribosomal protein L1 n=1 Tax=Zea mays RepID=B6TB66_MAIZE 0.0
FL-Next: sp=Ribosomal protein; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: 50s ribosomal protein l1 0.0
C-terminus
uagpf_v2_unigene16696 uagpf v2.0 1053
AutoFact: large subunit ribosomal protein L6 [Arabidopsis thaliana] gb|AAK73258.1| putative ribosomal protein L6 [Arabidopsis thaliana] gb|AAD15497.2| putative ribosomal protein L6 [Arabidopsis thaliana] gb|AAM66004.1| putative ribosomal protein L6 [Arabidopsis tha 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l6 0.0
Complete
uagpf_v2_unigene17017 uagpf v2.0 624
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: werner syndrome-like exonuclease-like 0.0
C-terminus
uagpf_v2_unigene17975 uagpf v2.0 722
AutoFact: 40S ribosomal protein S17-like protein [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s17 0.0
Putative Complete
uagpf_v2_unigene18067 uagpf v2.0 792
AutoFact: fiber protein Fb2 [Gossypium barbadense] 6.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene18082 uagpf v2.0 899
AutoFact: Rac-like GTP binding protein n=1 Tax=Picea mariana RepID=O65062_PICMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rop-family small gtpase 0.0
C-terminus
uagpf_v2_unigene18455 uagpf v2.0 629
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 9.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: werner syndrome-like exonuclease-like 0.0
C-terminus
uagpf_v2_unigene18472 uagpf v2.0 374
AutoFact: 40S ribosomal protein S17-like protein [Solanum tuberosum] 0.0
Blast2go: 40s ribosomal protein s17 0.0
unknown
uagpf_v2_unigene18690 uagpf v2.0 833
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 3.77342e-21
C-terminus
uagpf_v2_unigene19134 uagpf v2.0 423
AutoFact: NEDD8-like protein RUB1 [Arabidopsis thaliana] sp|Q9SHE7.3|RUB1_ARATH RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName: Full=Ubiquitin; Contains: RecName: Full=NEDD8-like protein RUB1; AltName: Full=Ubiquitin-related protein 1; Short=AtR 7.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiquitin 2 0.0
N-terminus
uagpf_v2_unigene19266 uagpf v2.0 937
AutoFact: ADP-ribosylation factor [Medicago sativa] emb|CAI29265.1| ADP-ribosylation factor 1 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adp-ribosylation factor 0.0
Complete
uagpf_v2_unigene19323 uagpf v2.0 1387
AutoFact: Ras-related protein Rab-18 n=4 Tax=Poaceae RepID=B6TCF9_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rab-18 0.0
Complete
uagpf_v2_unigene19667 uagpf v2.0 1248
AutoFact: 60S ribosomal protein L23A n=1 Tax=Fritillaria agrestis RepID=RL23A_FRIAG 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l23a 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain