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Assembly Name: uagpf v2.0

Name: negative regulation of transcription, DNA-dependent

Term: GO:0045892  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene636 uagpf v2.0 890
• AutoFact: auxin response factor 2 [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: auxin response factor-like protein 0.0
C-terminus
uagpf_v2_unigene887 uagpf v2.0 619
• AutoFact: Flavoprotein wrbA, putative n=1 Tax=Ricinus communis RepID=B9SI05_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: quinone reductase family protein 0.0
N-terminus
uagpf_v2_unigene1254 uagpf v2.0 664
• AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
• FL-Next: sp=DNA damage-binding protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Blast2go: dna damage-binding protein 1a 0.0
C-terminus
uagpf_v2_unigene1913 uagpf v2.0 1081
• AutoFact: calcium-dependent lipid-binding domain-containing protein [Arabidopsis thaliana] ref|NP_001030908.1| calcium-dependent lipid-binding domain-containing protein [Arabidopsis thaliana] emb|CAB94141.1| CaLB protein [Arabidopsis thaliana] gb|AAO42810.1| At3g61 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: integral membrane single c2 domain protein 0.0
N-terminus
uagpf_v2_unigene2465 uagpf v2.0 405
• AutoFact: Histone deacetylase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TG19_PHYPA 0.0
• Blast2go: histone deacetylase 0.0
unknown
uagpf_v2_unigene2760 uagpf v2.0 441
• AutoFact: auxin response factor 2 [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: auxin response factor-like protein 0.0
Internal
uagpf_v2_unigene3189 uagpf v2.0 270
• AutoFact: GC-rich sequence DNA-binding factor [Arabidopsis thaliana] dbj|BAB10004.1| unnamed protein product [Arabidopsis thaliana] dbj|BAF36503.1| transcriptional repressor ILP1 [Arabidopsis thaliana] gb|AED91319.1| GC-rich sequence DNA-binding factor [Arabidopsis 7.0e-12
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: gc-rich sequence dna-binding factor 1-like 1.78089e-19
Internal
uagpf_v2_unigene3239 uagpf v2.0 831
• AutoFact: Histone deacetylase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TG19_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone deacetylase 0.0
N-terminus
uagpf_v2_unigene3591 uagpf v2.0 405
• AutoFact: Transcriptional corepressor LEUNIG n=1 Tax=Arabidopsis thaliana RepID=F4JUD2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcriptional corepressor leunig 0.0
Putative N-terminus
uagpf_v2_unigene4090 uagpf v2.0 1415
• AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: auxin response factor 2 0.0
Putative C-terminus
uagpf_v2_unigene4268 uagpf v2.0 554
• AutoFact: protein pleiotropic regulatory locus 1 [Arabidopsis thaliana] sp|Q42384.1|PRL1_ARATH RecName: Full=Protein pleiotropic regulatory locus 1; Short=Protein PRL1; AltName: Full=MOS4-associated complex protein 2; Short=MAC protein 2 emb|CAA58031.1| PRL1 [Arabi 0.0
• FL-Next: tr=Os03g0339100 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: protein pleiotropic regulatory locus 1-like 0.0
N-terminus
uagpf_v2_unigene4669 uagpf v2.0 709
• AutoFact: Histone deacetylase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TSU0_VITVI 0.0
• FL-Next: sp=Histone deacetylase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: histone deacetylase 0.0
N-terminus
uagpf_v2_unigene4691 uagpf v2.0 764
• AutoFact: Cycloartenol synthase n=2 Tax=Pinaceae RepID=Q9FQM1_ABIMA 0.0
• FL-Next: tr=Cycloartenol synthase; Abies magnifica (Red fir). 0.0
• Blast2go: cycloartenol synthase 0.0
N-terminus
uagpf_v2_unigene4974 uagpf v2.0 602
• AutoFact: Flavoprotein wrbA, putative n=1 Tax=Ricinus communis RepID=B9SI05_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: quinone reductase family protein 0.0
C-terminus
uagpf_v2_unigene5546 uagpf v2.0 1620
• AutoFact: protein GT-2-like 1 [Arabidopsis thaliana] gb|AEE31573.1| protein GT-2-like 1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
uagpf_v2_unigene5595 uagpf v2.0 820
• AutoFact: pfam00400, WD40, WD domain, G-beta repeat 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcriptional corepressor leunig 0.0
Complete
uagpf_v2_unigene5949 uagpf v2.0 361
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: zinc ion binding protein 0.0
Internal
uagpf_v2_unigene6065 uagpf v2.0 1989
• AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: auxin response factor 2 0.0
N-terminus
uagpf_v2_unigene6145 uagpf v2.0 1084
• AutoFact: SIN3 component, histone deacetylase complex n=1 Tax=Populus trichocarpa RepID=B9HU88_POPTR 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: sin3 histone deacetylase complex 3.22299e-44
Putative Complete
uagpf_v2_unigene6690 uagpf v2.0 390
• AutoFact: Transcription repressor MYB4 n=6 Tax=Brassicaceae RepID=MYB4_ARATH 3.00018e-42
• FL-Next: tr=R2R3-MYB transcription factor MYB5; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: transcription factor myb4 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain