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Assembly Name: uagpf v2.0

Name: helicase activity

Term: GO:0004386  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene2 uagpf v2.0 434
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GWX1_POPTR 0.0
• FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: f-box protein at3g54460-like 0.0
Internal
uagpf_v2_unigene357 uagpf v2.0 368
• AutoFact: Desaturase delta 9 n=2 Tax=Picea RepID=Q8S4Q3_PICGL 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene3247 uagpf v2.0 608
• AutoFact: zinc finger-related and helicase and IBR domain-containing protein [Arabidopsis thaliana] sp|P0CE10.1|Y4102_ARATH RecName: Full=Putative uncharacterized protein At4g01020, chloroplastic; Flags: Precursor gb|AEE81967.1| zinc finger-related and helicase and 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein chloroplastic-like 0.0
Internal
uagpf_v2_unigene4664 uagpf v2.0 701
• AutoFact: Chromatin remodelling complex ATPase chain isw-1, putative n=1 Tax=Ricinus communis RepID=B9S022_RICCO 8.0e-30
• Blast2go: chromatin remodelling complex atpase chain isw- 3.6255e-33
unknown
uagpf_v2_unigene5332 uagpf v2.0 371
• AutoFact: putative helicase [Arabidopsis thaliana] 0.0
• Blast2go: dna helicase ino80-like 0.0
unknown
uagpf_v2_unigene6079 uagpf v2.0 518
• AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H8S6_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: helicase-like transcription factor 0.0
Internal
uagpf_v2_unigene9960 uagpf v2.0 397
• AutoFact: pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pre-mrna-splicing factor atp-dependent rna helicase prp16-like 0.0
C-terminus
uagpf_v2_unigene10511 uagpf v2.0 260
• AutoFact: DUF3535 domain containing protein 0.0001
• FL-Next: tr=Putative SNF2 domain-containing protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: tata box binding protein associated factor-like protein 0.0
Internal
uagpf_v2_unigene10512 uagpf v2.0 473
• AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-16
• FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: helicase and zinc finger domain-containing protein 0.0
Internal
uagpf_v2_unigene12636 uagpf v2.0 581
• AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-16
• Blast2go: helicase and zinc finger domain-containing protein 0.0
unknown
uagpf_v2_unigene13443 uagpf v2.0 696
• AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AAC97224.1| putative helicase [Arabidopsis thaliana] gb|AAL24339.1| SNF2/RAD54 family (ETL1 subfamily) protein [Arabidopsis thaliana] gb|AAO00936.1| SNF2/RAD54 family (ETL1 subfamily) p 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: snf2 family dna-dependent atpase 0.0
Complete
uagpf_v2_unigene17596 uagpf v2.0 1039
• AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI00019843BD 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-dependent helicase rhp16-like 0.0
Putative C-terminus
uagpf_v2_unigene25014 uagpf v2.0 436
• AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MYK9_POPTR 0.0
• Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
unknown
uagpf_v2_unigene25435 uagpf v2.0 461
• AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-16
• Blast2go: helicase and zinc finger domain-containing protein 0.0
unknown
uagpf_v2_unigene25689 uagpf v2.0 473
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
N-terminus
uagpf_v2_unigene25877 uagpf v2.0 291
• AutoFact: Os07g0681600 protein n=3 Tax=Oryza sativa RepID=Q7XHW1_ORYSJ 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Blast2go: werner syndrome atp-dependent helicase-like 3.73771e-11
C-terminus
uagpf_v2_unigene25992 uagpf v2.0 615
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
C-terminus
uagpf_v2_unigene26017 uagpf v2.0 365
• AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI00019843BD 0.0
• FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent helicase rhp16-like 0.0
Internal
uagpf_v2_unigene31698 uagpf v2.0 446
• AutoFact: putative ATP-dependent RNA helicase [Oryza sativa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 17-like 0.0
Internal
uagpf_v2_unigene32136 uagpf v2.0 648
• AutoFact: putative helicase [Arabidopsis thaliana] 0.0
• Blast2go: dna helicase ino80-like 0.0
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain