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Assembly Name: uagpf v2.0

Name: chromatin

Term: GO:0000785  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene848 uagpf v2.0 309
AutoFact: Histone acetyltransferase n=5 Tax=rosids RepID=B9H794_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
C-terminus
uagpf_v2_unigene1246 uagpf v2.0 250
AutoFact: Putative methyl-binding domain protein n=1 Tax=Cryptomeria japonica RepID=Q1XG62_CRYJA 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl-binding domain protein 0.0
N-terminus
uagpf_v2_unigene2957 uagpf v2.0 814
AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 0.0
N-terminus
uagpf_v2_unigene3401 uagpf v2.0 378
AutoFact: FCA gamma [Brassica napus] 1.0e-11
Blast2go: flowering time control protein 1.37341e-12
unknown
uagpf_v2_unigene5415 uagpf v2.0 1159
AutoFact: pfam00385, Chromo, Chromodomain 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: terminal flower 2 protein 0.0
Putative Complete
uagpf_v2_unigene5585 uagpf v2.0 720
AutoFact: Histone acetyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJM4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
C-terminus
uagpf_v2_unigene5741 uagpf v2.0 565
AutoFact: FCA gamma [Pisum sativum] 1.0e-17
Blast2go: flowering time control protein fca-like 1.49858e-21
Coding
uagpf_v2_unigene8847 uagpf v2.0 333
AutoFact: CHD3-type chromatin-remodeling factor PICKLE [Arabidopsis thaliana] sp|Q9S775.1|PKL_ARATH RecName: Full=CHD3-type chromatin-remodeling factor PICKLE; AltName: Full=Protein GYMNOS gb|AAF07084.1|AF185578_1 GYMNOS/PICKLE [Arabidopsis thaliana] gb|AAF13875.1| 0.0
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
uagpf_v2_unigene10526 uagpf v2.0 498
AutoFact: Histone acetyltransferase n=5 Tax=rosids RepID=B9H794_POPTR 0.0
Blast2go: histone acetyltransferase 0.0
unknown
uagpf_v2_unigene11760 uagpf v2.0 1148
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana] gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Complete
uagpf_v2_unigene14691 uagpf v2.0 557
AutoFact: pfam00385, Chromo, Chromodomain 1.0e-13
FL-Next: sp=Chromo domain-containing protein LHP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: terminal flower 2 protein 0.0
Internal
uagpf_v2_unigene15639 uagpf v2.0 749
AutoFact: Putative methyl-binding domain protein n=1 Tax=Cryptomeria japonica RepID=Q1XG62_CRYJA 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl-binding domain protein 0.0
C-terminus
uagpf_v2_unigene15680 uagpf v2.0 560
AutoFact: Flowering time control protein-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0ZL31_PICSI 7.0e-11
Blast2go: flowering time control protein 2.21199e-12
unknown
uagpf_v2_unigene29669 uagpf v2.0 75
AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
Blast2go: flowering time control protein fpa 0.0
unknown
uagpf_v2_unigene32620 uagpf v2.0 240
AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
Blast2go: flowering time control protein fpa 0.0
Coding
uagpf_v2_unigene33523 uagpf v2.0 462
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana] gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene34768 uagpf v2.0 249
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: structural maintenance of chromosomes protein 3-like 0.0
Internal
uagpf_v2_unigene37658 uagpf v2.0 486
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana] gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
uagpf_v2_unigene40031 uagpf v2.0 265
AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 0.0
Internal
uagpf_v2_unigene40866 uagpf v2.0 360
AutoFact: FCA gamma [Brassica napus] 1.0e-11
FL-Next: Isoform Alpha of Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA 0.0
Blast2go: flowering time control protein 1.37341e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain